Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 MIR217-201ENST00000384817 110 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 RNU2-42P-201ENST00000410697 113 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 PTP4A1P5-201ENST00000420305 455 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC234781.2-201ENST00000426370 994 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC017083.1-201ENST00000428093 483 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 GEMIN8P3-201ENST00000445417 720 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 MTCYBP16-201ENST00000509187 1129 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 MRPS33P3-201ENST00000513456 322 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 RNA5SP208-201ENST00000516156 78 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 RNU2-27P-201ENST00000516185 142 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 RNU6-1225P-201ENST00000516336 65 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 RNU6-885P-201ENST00000516607 104 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 MTCO1P47-201ENST00000523889 1271 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC011611.1-201ENST00000552179 197 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC006116.10-201ENST00000591836 581 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC233280.2-201ENST00000603917 1070 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC009220.3-201ENST00000604318 586 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 Z94722.1-201ENST00000604328 474 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC018638.7-201ENST00000605836 1114 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AL360219.1-201ENST00000610230 366 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC023158.2-201ENST00000614876 543 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC067852.7-201ENST00000623270 535 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC026422.1-201ENST00000623961 452 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 AC126323.6-202ENST00000568092 3511 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 NEAT1-202ENST00000501122 22743 ntBASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
KRT28Q7Z3Y7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AP000776.1-201ENST00000530032 1663 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 OR5H2-201ENST00000355273 945 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 RNU6-582P-201ENST00000362989 107 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 SNORA38.1-201ENST00000364172 131 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 RNU6-1151P-201ENST00000384684 107 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 RNU6-757P-201ENST00000410334 100 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 RNA5SP80-201ENST00000410475 111 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AL365396.1-201ENST00000430854 671 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 MTCYBP34-201ENST00000439552 670 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 RPL23AP15-201ENST00000450202 459 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 RPL7P18-201ENST00000478965 734 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 RPL23AP94-201ENST00000512518 302 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 Y_RNA.688-201ENST00000516565 95 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 RN7SKP289-201ENST00000517244 295 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AP001189.2-201ENST00000527320 189 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 SERPINE4P-201ENST00000554978 281 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AC008015.1-201ENST00000555505 465 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AC012493.2-201ENST00000595083 291 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AC010200.2-201ENST00000605098 235 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AC131235.4-201ENST00000609288 620 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AP000676.3-201ENST00000623299 569 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 AC116618.1-201ENST00000634617 774 ntBASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRT28Q7Z3Y7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.02□□□□□ -1.61
KRT28Q7Z3Y7 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.02□□□□□ -1.61
KRT28Q7Z3Y7 AC109315.1-201ENST00000584143 1347 ntBASIC5.02□□□□□ -1.61
KRT28Q7Z3Y7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.02□□□□□ -1.61
KRT28Q7Z3Y7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT28Q7Z3Y7 AC016716.1-201ENST00000265882 708 ntBASIC5.02□□□□□ -1.61
KRT28Q7Z3Y7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT28Q7Z3Y7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.02□□□□□ -1.61
KRT28Q7Z3Y7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.02□□□□□ -1.61
KRT28Q7Z3Y7 PRELID3BP11-201ENST00000414230 479 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms