Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SNORA20.1-201ENST00000364790 130 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 RNU6-432P-201ENST00000384196 109 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 OR6C66P-201ENST00000414917 930 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AL137014.1-201ENST00000420490 1226 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 NMD3P2-201ENST00000421815 761 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 RPL23AP19-201ENST00000436229 369 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 RPL12P18-201ENST00000437175 325 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AC096775.1-201ENST00000437724 448 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 CYCSP51-201ENST00000443545 318 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 PPIAP7-201ENST00000454070 489 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AC011225.1-201ENST00000457751 369 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AC104563.1-201ENST00000476147 376 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 RN7SL714P-201ENST00000487050 298 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AC055855.1-201ENST00000489563 579 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 RNU6-1023P-201ENST00000516137 106 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 Y_RNA.670-201ENST00000516255 105 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 RNA5SP230-201ENST00000517039 122 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 MTND4P7-201ENST00000523876 130 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AP000620.1-201ENST00000527147 504 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 RPA2P3-201ENST00000533268 770 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 GNAI2P1-201ENST00000541815 315 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 MIR4703-201ENST00000577728 79 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AC008687.2-201ENST00000597865 520 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 SNORA74.4-201ENST00000607595 199 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 MIR6133-201ENST00000617057 108 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 AL512643.1-201ENST00000635735 524 ntBASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXR1Q6PIV2 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.09□□□□□ -1.44
FOXR1Q6PIV2 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 RNU6-200P-201ENST00000364743 107 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 SNORA17A-201ENST00000391185 133 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 ARF4P3-201ENST00000397387 509 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 RPL21P1-201ENST00000399532 476 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 EIF5P1-201ENST00000400019 1231 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 RNU2-29P-201ENST00000410423 189 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 RN7SKP222-201ENST00000410651 315 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AL590135.1-201ENST00000422215 156 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 PDSS1P1-201ENST00000422953 1114 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 CHIAP3-201ENST00000423668 1133 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AC137499.1-201ENST00000427602 88 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AC092013.1-201ENST00000438795 332 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AL353662.1-201ENST00000439099 327 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 FTH1P25-201ENST00000447665 469 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 PRELID3BP1-201ENST00000457142 540 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 RNU7-182P-201ENST00000459009 62 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AC090453.1-201ENST00000495560 436 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AC022447.4-201ENST00000504053 364 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AC010350.1-201ENST00000504908 231 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 Y_RNA.673-201ENST00000516306 88 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 RNA5SP340-201ENST00000517132 107 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 IGKV3D-25-201ENST00000519599 235 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AL355297.3-201ENST00000604082 446 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AC096772.1-201ENST00000609146 564 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AL021879.1-201ENST00000611756 288 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 MIR6128-201ENST00000615528 109 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AL356274.1-201ENST00000617064 410 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AC024884.1-201ENST00000620583 399 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 SNORA17.5-201ENST00000630429 132 ntBASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
FOXR1Q6PIV2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms