Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC008802.1-201ENST00000519121 791 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 MIR548AB-201ENST00000584917 84 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC011451.2-201ENST00000604303 598 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AL390816.3-201ENST00000604527 1066 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AL109618.2-201ENST00000605527 211 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC090525.3-201ENST00000605601 189 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC010857.1-201ENST00000606398 594 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC055764.2-201ENST00000610089 670 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC138932.5-201ENST00000617759 563 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC018816.2-201ENST00000621460 353 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 MIR7702-201ENST00000621931 59 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AP001005.3-201ENST00000622049 129 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AP000843.1-201ENST00000624880 701 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 SEPT14P19-203ENST00000633205 211 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 MKKS-204ENST00000639674 192 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC016588.2-201ENST00000632484 3021 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 ZNF962P-201ENST00000443465 3140 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 RPL21P132-201ENST00000331267 462 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 Y_RNA.303-201ENST00000364998 94 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 SUGT1P1-201ENST00000379514 476 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 RNU6-259P-201ENST00000383999 107 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 RPL23AP47-201ENST00000408017 460 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC091862.1-201ENST00000438016 1100 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 PTMAP3-201ENST00000447474 330 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AL034418.1-201ENST00000448675 860 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC009963.2-201ENST00000453431 138 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 DNAJC19P1-201ENST00000455312 319 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 RPS27P23-201ENST00000487608 251 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 RPS4XP15-201ENST00000489210 795 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC109464.2-201ENST00000510242 943 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC048346.1-201ENST00000510247 144 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC109471.1-201ENST00000511631 612 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 RPL7L1P13-201ENST00000511702 739 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 RN7SKP244-201ENST00000516513 307 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 RNU6-885P-201ENST00000516607 104 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC004217.3-201ENST00000551552 878 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 SERPINE4P-201ENST00000554978 281 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 MIR548S-201ENST00000581352 82 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC091135.1-201ENST00000585943 307 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AF250324.2-201ENST00000608299 610 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC017083.3-201ENST00000609955 700 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 AC114781.5-201ENST00000615297 108 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 CR848007.1-201ENST00000442354 1699 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
ZNF549Q6P9A3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms