Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 BX323046.1-201ENST00000610145 535 ntBASIC3.13□□□□□ -1.91
REEP3Q6NUK4 AC099778.2-201ENST00000610904 211 ntBASIC3.13□□□□□ -1.91
REEP3Q6NUK4 AC105227.2-201ENST00000615075 605 ntBASIC3.13□□□□□ -1.91
REEP3Q6NUK4 AL445493.3-201ENST00000619568 477 ntBASIC3.13□□□□□ -1.91
REEP3Q6NUK4 AL356321.1-201ENST00000621360 228 ntBASIC3.13□□□□□ -1.91
REEP3Q6NUK4 AC006963.1-201ENST00000624003 1052 ntBASIC3.13□□□□□ -1.91
REEP3Q6NUK4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
REEP3Q6NUK4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.13□□□□□ -1.91
REEP3Q6NUK4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
REEP3Q6NUK4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
REEP3Q6NUK4 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
REEP3Q6NUK4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
REEP3Q6NUK4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
REEP3Q6NUK4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
REEP3Q6NUK4 AL136164.4-201ENST00000625013 2135 ntBASIC3.13□□□□□ -1.91
REEP3Q6NUK4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 RNA5SP197-201ENST00000363357 119 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 RNU6-481P-201ENST00000384194 107 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 RNU6-339P-201ENST00000384310 107 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 RPL31P1-201ENST00000398116 372 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 OR51A3P-201ENST00000413596 924 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AL512661.1-201ENST00000434586 1253 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 B3GNT2P1-201ENST00000434960 952 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 GTF2IP12-201ENST00000456547 356 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AC089999.1-201ENST00000460336 374 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 PRDX3P4-201ENST00000470828 747 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 RPS4XP6-201ENST00000477670 797 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AC108078.3-201ENST00000502633 489 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AC025768.1-201ENST00000510057 267 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AC010265.1-201ENST00000513509 211 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 MTCO2P32-201ENST00000514865 403 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 PRELID3BP4-201ENST00000515476 571 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 RN7SKP13-201ENST00000515933 244 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AC093331.1-201ENST00000521474 169 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AL845331.3-202ENST00000562856 261 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 MIR4474-201ENST00000579189 78 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AL355812.1-201ENST00000603215 216 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AC024941.1-201ENST00000612250 334 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AL118556.2-201ENST00000614375 824 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AC068722.2-201ENST00000618734 544 ntBASIC3.12□□□□□ -1.91
REEP3Q6NUK4 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
REEP3Q6NUK4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.11□□□□□ -1.91
REEP3Q6NUK4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
REEP3Q6NUK4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
REEP3Q6NUK4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.11□□□□□ -1.91
REEP3Q6NUK4 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
REEP3Q6NUK4 SNORD56.3-201ENST00000363507 71 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 U3.11-201ENST00000364476 212 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 RNA5SP515-201ENST00000364570 118 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 MIR649-201ENST00000384843 97 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 SNORD65C-201ENST00000390962 71 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 RN7SKP159-201ENST00000410657 292 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 Y_RNA.625-201ENST00000411256 107 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 RAB28P1-201ENST00000411517 641 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.11□□□□□ -1.91
REEP3Q6NUK4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.11□□□□□ -1.91
REEP3Q6NUK4 AC009237.2-201ENST00000421358 284 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
REEP3Q6NUK4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.11□□□□□ -1.91
REEP3Q6NUK4 GTF2IP23-201ENST00000423746 351 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 HSFY1P1-201ENST00000423928 1178 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 ATP5JP1-201ENST00000431631 322 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 AC002542.1-201ENST00000440683 193 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.11□□□□□ -1.91
REEP3Q6NUK4 HSFY3P-201ENST00000444242 1191 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 Z99127.3-201ENST00000448158 395 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 AC125238.1-201ENST00000448842 249 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 RBMY2UP-201ENST00000453474 324 ntBASIC3.11□□□□□ -1.91
REEP3Q6NUK4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms