Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC009969.1-201ENST00000438726 172 ntBASIC3.42□□□□□ -1.86
RFX7Q2KHR2 RPL32P28-201ENST00000443577 397 ntBASIC3.42□□□□□ -1.86
RFX7Q2KHR2 RN7SL283P-201ENST00000489055 303 ntBASIC3.42□□□□□ -1.86
RFX7Q2KHR2 AC034159.1-201ENST00000513885 583 ntBASIC3.42□□□□□ -1.86
RFX7Q2KHR2 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.42□□□□□ -1.86
RFX7Q2KHR2 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.42□□□□□ -1.86
RFX7Q2KHR2 AC103881.1-201ENST00000603476 538 ntBASIC3.42□□□□□ -1.86
RFX7Q2KHR2 AC010680.4-201ENST00000605334 543 ntBASIC3.42□□□□□ -1.86
RFX7Q2KHR2 AC007619.2-201ENST00000605743 379 ntBASIC3.42□□□□□ -1.86
RFX7Q2KHR2 AC009039.2-201ENST00000624524 529 ntBASIC3.42□□□□□ -1.86
RFX7Q2KHR2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RFX7Q2KHR2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RFX7Q2KHR2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RFX7Q2KHR2 AF127577.6-201ENST00000623352 2191 ntBASIC3.42□□□□□ -1.86
RFX7Q2KHR2 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
RFX7Q2KHR2 AC017002.4-201ENST00000604721 1525 ntBASIC3.42□□□□□ -1.86
RFX7Q2KHR2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
RFX7Q2KHR2 AC093010.3-201ENST00000570269 15214 ntBASIC3.42□□□□□ -1.86
RFX7Q2KHR2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RFX7Q2KHR2 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RFX7Q2KHR2 MIR26A1-201ENST00000362205 77 ntBASIC3.41□□□□□ -1.86
RFX7Q2KHR2 RNA5SP432-201ENST00000362480 116 ntBASIC3.41□□□□□ -1.86
RFX7Q2KHR2 U3.12-201ENST00000364498 214 ntBASIC3.41□□□□□ -1.86
RFX7Q2KHR2 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.41□□□□□ -1.86
RFX7Q2KHR2 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.41□□□□□ -1.86
RFX7Q2KHR2 AC233982.1-201ENST00000451247 436 ntBASIC3.41□□□□□ -1.86
RFX7Q2KHR2 RN7SL432P-201ENST00000484057 298 ntBASIC3.41□□□□□ -1.86
RFX7Q2KHR2 RNU6-943P-201ENST00000516960 98 ntBASIC3.41□□□□□ -1.86
RFX7Q2KHR2 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.41□□□□□ -1.86
RFX7Q2KHR2 AC093331.1-201ENST00000521474 169 ntBASIC3.41□□□□□ -1.86
RFX7Q2KHR2 COX6CP8-201ENST00000522620 226 ntBASIC3.41□□□□□ -1.86
RFX7Q2KHR2 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.41□□□□□ -1.86
RFX7Q2KHR2 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.41□□□□□ -1.86
RFX7Q2KHR2 TRAV37-201ENST00000553906 342 ntBASIC3.41□□□□□ -1.86
RFX7Q2KHR2 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.41□□□□□ -1.86
RFX7Q2KHR2 MIR3945-201ENST00000581853 98 ntBASIC3.41□□□□□ -1.86
RFX7Q2KHR2 AC096947.1-201ENST00000603233 470 ntBASIC3.41□□□□□ -1.86
RFX7Q2KHR2 AL020991.1-201ENST00000612314 373 ntBASIC3.41□□□□□ -1.86
RFX7Q2KHR2 ZNF90P1-201ENST00000480493 1951 ntBASIC3.41□□□□□ -1.86
RFX7Q2KHR2 AL136360.1-201ENST00000503377 1900 ntBASIC3.41□□□□□ -1.86
RFX7Q2KHR2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.41□□□□□ -1.86
RFX7Q2KHR2 AL118496.1-201ENST00000440201 1812 ntBASIC3.41□□□□□ -1.86
RFX7Q2KHR2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RFX7Q2KHR2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.4□□□□□ -1.86
RFX7Q2KHR2 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
RFX7Q2KHR2 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
RFX7Q2KHR2 EI24P2-201ENST00000397776 1076 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 GSTA12P-201ENST00000402398 508 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 BMS1P22-201ENST00000414726 313 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.4□□□□□ -1.86
RFX7Q2KHR2 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.4□□□□□ -1.86
RFX7Q2KHR2 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.4□□□□□ -1.86
RFX7Q2KHR2 AC073464.3-201ENST00000422564 712 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 AC087499.2-201ENST00000432861 149 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.4□□□□□ -1.86
RFX7Q2KHR2 RAB28P3-201ENST00000448325 597 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 SNORD108-201ENST00000459332 71 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 AC092451.1-201ENST00000480211 153 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 AC126121.1-201ENST00000482313 553 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 AC147055.1-201ENST00000509261 750 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 SETP12-201ENST00000514068 805 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 SCGB1D5P-201ENST00000515134 247 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 IGHV3-76-201ENST00000522465 295 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 AP000857.1-201ENST00000532151 543 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.4□□□□□ -1.86
RFX7Q2KHR2 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.4□□□□□ -1.86
RFX7Q2KHR2 AL049874.4-201ENST00000557593 255 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 AC068714.1-201ENST00000559623 800 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 HMGB1P6-201ENST00000569046 646 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 AC138761.3-201ENST00000579993 334 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 AC006116.7-201ENST00000590141 756 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 PSMA6P4-201ENST00000603247 718 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 AC136601.2-201ENST00000604356 474 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 AL359535.1-201ENST00000612100 1087 ntBASIC3.4□□□□□ -1.86
RFX7Q2KHR2 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFX7Q2KHR2 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.4□□□□□ -1.87
RFX7Q2KHR2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.4□□□□□ -1.87
RFX7Q2KHR2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RFX7Q2KHR2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFX7Q2KHR2 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.4□□□□□ -1.87
RFX7Q2KHR2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.39□□□□□ -1.87
RFX7Q2KHR2 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFX7Q2KHR2 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RFX7Q2KHR2 MIR181B1-201ENST00000385240 110 ntBASIC3.39□□□□□ -1.87
RFX7Q2KHR2 AC004987.3-201ENST00000413879 771 ntBASIC3.39□□□□□ -1.87
RFX7Q2KHR2 AL356806.1-201ENST00000422524 916 ntBASIC3.39□□□□□ -1.87
RFX7Q2KHR2 AC010683.1-201ENST00000473673 378 ntBASIC3.39□□□□□ -1.87
RFX7Q2KHR2 AC111000.2-201ENST00000507775 550 ntBASIC3.39□□□□□ -1.87
RFX7Q2KHR2 SNORA9.3-201ENST00000516383 129 ntBASIC3.39□□□□□ -1.87
RFX7Q2KHR2 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.39□□□□□ -1.87
RFX7Q2KHR2 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.39□□□□□ -1.87
RFX7Q2KHR2 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.39□□□□□ -1.87
RFX7Q2KHR2 MIR3605-201ENST00000583214 100 ntBASIC3.39□□□□□ -1.87
RFX7Q2KHR2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFX7Q2KHR2 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RFX7Q2KHR2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFX7Q2KHR2 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFX7Q2KHR2 MIR34A-201ENST00000385130 110 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 RPS4XP8-201ENST00000402039 771 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 AL590004.2-201ENST00000404787 371 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms