Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.34□□□□□ -1.87
TPM4P67936 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.34□□□□□ -1.87
TPM4P67936 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TPM4P67936 PABPC1P7-201ENST00000413177 1513 ntBASIC3.34□□□□□ -1.88
TPM4P67936 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
TPM4P67936 Z82195.2-201ENST00000612348 18351 ntBASIC3.33□□□□□ -1.88
TPM4P67936 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.33□□□□□ -1.88
TPM4P67936 DEFB109C-201ENST00000382575 264 ntBASIC3.33□□□□□ -1.88
TPM4P67936 DEFB109B-201ENST00000382656 264 ntBASIC3.33□□□□□ -1.88
TPM4P67936 RNU6-629P-201ENST00000384061 103 ntBASIC3.33□□□□□ -1.88
TPM4P67936 MIR181B1-201ENST00000385240 110 ntBASIC3.33□□□□□ -1.88
TPM4P67936 SAR1AP2-201ENST00000392696 594 ntBASIC3.33□□□□□ -1.88
TPM4P67936 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TPM4P67936 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.33□□□□□ -1.88
TPM4P67936 AL354719.1-201ENST00000406535 843 ntBASIC3.33□□□□□ -1.88
TPM4P67936 RPL21P40-201ENST00000428586 483 ntBASIC3.33□□□□□ -1.88
TPM4P67936 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.33□□□□□ -1.88
TPM4P67936 RPL37P1-201ENST00000432310 284 ntBASIC3.33□□□□□ -1.88
TPM4P67936 GOT2P5-201ENST00000433995 546 ntBASIC3.33□□□□□ -1.88
TPM4P67936 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.33□□□□□ -1.88
TPM4P67936 MUPP-201ENST00000438111 566 ntBASIC3.33□□□□□ -1.88
TPM4P67936 RPL6P5-201ENST00000445678 828 ntBASIC3.33□□□□□ -1.88
TPM4P67936 AL133547.1-201ENST00000448546 220 ntBASIC3.33□□□□□ -1.88
TPM4P67936 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.33□□□□□ -1.88
TPM4P67936 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.33□□□□□ -1.88
TPM4P67936 RN7SL863P-201ENST00000462370 296 ntBASIC3.33□□□□□ -1.88
TPM4P67936 RPL21P8-201ENST00000465083 535 ntBASIC3.33□□□□□ -1.88
TPM4P67936 AC109925.1-201ENST00000478069 331 ntBASIC3.33□□□□□ -1.88
TPM4P67936 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TPM4P67936 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.33□□□□□ -1.88
TPM4P67936 AL024509.2-201ENST00000493462 493 ntBASIC3.33□□□□□ -1.88
TPM4P67936 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.33□□□□□ -1.88
TPM4P67936 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.33□□□□□ -1.88
TPM4P67936 RN7SKP272-201ENST00000516988 232 ntBASIC3.33□□□□□ -1.88
TPM4P67936 AP004371.1-201ENST00000525240 214 ntBASIC3.33□□□□□ -1.88
TPM4P67936 AC034105.3-201ENST00000565294 442 ntBASIC3.33□□□□□ -1.88
TPM4P67936 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TPM4P67936 MTCO3P24-201ENST00000572729 782 ntBASIC3.33□□□□□ -1.88
TPM4P67936 IGHV3-29-201ENST00000604817 344 ntBASIC3.33□□□□□ -1.88
TPM4P67936 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.33□□□□□ -1.88
TPM4P67936 AL590282.1-201ENST00000610379 1136 ntBASIC3.33□□□□□ -1.88
TPM4P67936 AC100793.4-201ENST00000613683 429 ntBASIC3.33□□□□□ -1.88
TPM4P67936 U73479.1-201ENST00000618062 168 ntBASIC3.33□□□□□ -1.88
TPM4P67936 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.33□□□□□ -1.88
TPM4P67936 AC010338.1-201ENST00000621823 717 ntBASIC3.33□□□□□ -1.88
TPM4P67936 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.33□□□□□ -1.88
TPM4P67936 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TPM4P67936 ZNF37BP-203ENST00000452306 1352 ntBASIC3.33□□□□□ -1.88
TPM4P67936 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.33□□□□□ -1.88
TPM4P67936 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
TPM4P67936 AC009487.2-201ENST00000420969 6821 ntBASIC3.33□□□□□ -1.88
TPM4P67936 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.32□□□□□ -1.88
TPM4P67936 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TPM4P67936 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TPM4P67936 SNORA7.4-201ENST00000384249 137 ntBASIC3.32□□□□□ -1.88
TPM4P67936 RNA5SP129-201ENST00000410276 118 ntBASIC3.32□□□□□ -1.88
TPM4P67936 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.32□□□□□ -1.88
TPM4P67936 AC018644.1-201ENST00000429934 551 ntBASIC3.32□□□□□ -1.88
TPM4P67936 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.32□□□□□ -1.88
TPM4P67936 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.32□□□□□ -1.88
TPM4P67936 AL590639.1-201ENST00000456484 337 ntBASIC3.32□□□□□ -1.88
TPM4P67936 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.32□□□□□ -1.88
TPM4P67936 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.32□□□□□ -1.88
TPM4P67936 AC126121.1-201ENST00000482313 553 ntBASIC3.32□□□□□ -1.88
TPM4P67936 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.32□□□□□ -1.88
TPM4P67936 AC111193.1-201ENST00000504097 155 ntBASIC3.32□□□□□ -1.88
TPM4P67936 PCNAP1-201ENST00000505363 709 ntBASIC3.32□□□□□ -1.88
TPM4P67936 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.32□□□□□ -1.88
TPM4P67936 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.32□□□□□ -1.88
TPM4P67936 AC008494.2-201ENST00000514544 370 ntBASIC3.32□□□□□ -1.88
TPM4P67936 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.32□□□□□ -1.88
TPM4P67936 FAM60DP-201ENST00000524174 632 ntBASIC3.32□□□□□ -1.88
TPM4P67936 AC004923.2-201ENST00000529649 369 ntBASIC3.32□□□□□ -1.88
TPM4P67936 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.32□□□□□ -1.88
TPM4P67936 AC090751.1-201ENST00000566966 267 ntBASIC3.32□□□□□ -1.88
TPM4P67936 AC007318.2-201ENST00000620999 243 ntBASIC3.32□□□□□ -1.88
TPM4P67936 CR392039.5-201ENST00000623201 510 ntBASIC3.32□□□□□ -1.88
TPM4P67936 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TPM4P67936 AL035425.3-201ENST00000564206 4996 ntBASIC3.32□□□□□ -1.88
TPM4P67936 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TPM4P67936 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.32□□□□□ -1.88
TPM4P67936 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TPM4P67936 SAGE4P-201ENST00000442271 3381 ntBASIC3.31□□□□□ -1.88
TPM4P67936 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TPM4P67936 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.31□□□□□ -1.88
TPM4P67936 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TPM4P67936 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.31□□□□□ -1.88
TPM4P67936 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TPM4P67936 RNU1-33P-201ENST00000364249 162 ntBASIC3.31□□□□□ -1.88
TPM4P67936 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.31□□□□□ -1.88
TPM4P67936 MRPL50P2-201ENST00000416821 482 ntBASIC3.31□□□□□ -1.88
TPM4P67936 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.31□□□□□ -1.88
TPM4P67936 HSPE1P1-201ENST00000421494 318 ntBASIC3.31□□□□□ -1.88
TPM4P67936 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.31□□□□□ -1.88
TPM4P67936 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.31□□□□□ -1.88
TPM4P67936 Z95327.1-201ENST00000446082 482 ntBASIC3.31□□□□□ -1.88
TPM4P67936 AC008571.1-201ENST00000467232 300 ntBASIC3.31□□□□□ -1.88
TPM4P67936 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.31□□□□□ -1.88
TPM4P67936 AC104687.1-201ENST00000485829 412 ntBASIC3.31□□□□□ -1.88
TPM4P67936 AC068724.1-201ENST00000487100 792 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms