Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.38□□□□□ -2.03
LSM3P62310 RPS7P15-201ENST00000415804 584 ntBASIC2.38□□□□□ -2.03
LSM3P62310 AC007064.3-201ENST00000422608 359 ntBASIC2.38□□□□□ -2.03
LSM3P62310 HMGN2P31-201ENST00000432430 273 ntBASIC2.38□□□□□ -2.03
LSM3P62310 AC091862.1-201ENST00000438016 1100 ntBASIC2.38□□□□□ -2.03
LSM3P62310 AC006994.1-201ENST00000438212 839 ntBASIC2.38□□□□□ -2.03
LSM3P62310 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.38□□□□□ -2.03
LSM3P62310 RPL23AP33-201ENST00000442301 452 ntBASIC2.38□□□□□ -2.03
LSM3P62310 RPL21P8-201ENST00000465083 535 ntBASIC2.38□□□□□ -2.03
LSM3P62310 AC090543.1-201ENST00000492168 485 ntBASIC2.38□□□□□ -2.03
LSM3P62310 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.38□□□□□ -2.03
LSM3P62310 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.38□□□□□ -2.03
LSM3P62310 AC008885.1-201ENST00000514930 301 ntBASIC2.38□□□□□ -2.03
LSM3P62310 RNU6-319P-201ENST00000516025 108 ntBASIC2.38□□□□□ -2.03
LSM3P62310 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.38□□□□□ -2.03
LSM3P62310 MTCYBP41-201ENST00000528913 1123 ntBASIC2.38□□□□□ -2.03
LSM3P62310 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.38□□□□□ -2.03
LSM3P62310 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.38□□□□□ -2.03
LSM3P62310 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
LSM3P62310 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.38□□□□□ -2.03
LSM3P62310 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.38□□□□□ -2.03
LSM3P62310 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.38□□□□□ -2.03
LSM3P62310 MTCO2P22-201ENST00000603246 681 ntBASIC2.38□□□□□ -2.03
LSM3P62310 AC090525.3-201ENST00000605601 189 ntBASIC2.38□□□□□ -2.03
LSM3P62310 RPL23AP88-201ENST00000605759 454 ntBASIC2.38□□□□□ -2.03
LSM3P62310 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC2.38□□□□□ -2.03
LSM3P62310 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
LSM3P62310 AL133370.2-201ENST00000619934 439 ntBASIC2.38□□□□□ -2.03
LSM3P62310 AC090617.7-201ENST00000623952 126 ntBASIC2.38□□□□□ -2.03
LSM3P62310 AL121594.5-201ENST00000631724 573 ntBASIC2.38□□□□□ -2.03
LSM3P62310 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
LSM3P62310 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.38□□□□□ -2.03
LSM3P62310 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.38□□□□□ -2.03
LSM3P62310 OR5BR1P-201ENST00000524992 1330 ntBASIC2.38□□□□□ -2.03
LSM3P62310 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.37□□□□□ -2.03
LSM3P62310 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.37□□□□□ -2.03
LSM3P62310 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.37□□□□□ -2.03
LSM3P62310 AC092435.3-201ENST00000565538 3654 ntBASIC2.37□□□□□ -2.03
LSM3P62310 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LSM3P62310 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LSM3P62310 FRG1BP-201ENST00000278882 761 ntBASIC2.37□□□□□ -2.03
LSM3P62310 AL672167.1-206ENST00000356293 943 ntBASIC2.37□□□□□ -2.03
LSM3P62310 RNU6-666P-201ENST00000363499 107 ntBASIC2.37□□□□□ -2.03
LSM3P62310 RNU1-101P-201ENST00000391171 127 ntBASIC2.37□□□□□ -2.03
LSM3P62310 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM3P62310 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM3P62310 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM3P62310 RPL21P112-201ENST00000434403 463 ntBASIC2.37□□□□□ -2.03
LSM3P62310 AC112220.1-201ENST00000434628 355 ntBASIC2.37□□□□□ -2.03
LSM3P62310 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.37□□□□□ -2.03
LSM3P62310 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.37□□□□□ -2.03
LSM3P62310 AC009961.3-201ENST00000449832 765 ntBASIC2.37□□□□□ -2.03
LSM3P62310 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.37□□□□□ -2.03
LSM3P62310 ARL4AP2-201ENST00000507378 601 ntBASIC2.37□□□□□ -2.03
LSM3P62310 RNU6-1308P-201ENST00000516817 103 ntBASIC2.37□□□□□ -2.03
LSM3P62310 RN7SKP277-201ENST00000516895 283 ntBASIC2.37□□□□□ -2.03
LSM3P62310 CKS1BP7-201ENST00000522230 235 ntBASIC2.37□□□□□ -2.03
LSM3P62310 AC239860.2-201ENST00000525886 270 ntBASIC2.37□□□□□ -2.03
LSM3P62310 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM3P62310 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM3P62310 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM3P62310 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM3P62310 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.37□□□□□ -2.03
LSM3P62310 AL606834.2-201ENST00000602954 668 ntBASIC2.37□□□□□ -2.03
LSM3P62310 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM3P62310 AC008277.2-201ENST00000605196 797 ntBASIC2.37□□□□□ -2.03
LSM3P62310 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.37□□□□□ -2.03
LSM3P62310 AC010435.1-201ENST00000623353 1177 ntBASIC2.37□□□□□ -2.03
LSM3P62310 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.37□□□□□ -2.03
LSM3P62310 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LSM3P62310 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
LSM3P62310 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LSM3P62310 AC011978.2-201ENST00000569835 2054 ntBASIC2.37□□□□□ -2.03
LSM3P62310 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LSM3P62310 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LSM3P62310 SNORA7.2-201ENST00000364446 145 ntBASIC2.36□□□□□ -2.03
LSM3P62310 U8.8-201ENST00000365399 135 ntBASIC2.36□□□□□ -2.03
LSM3P62310 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.36□□□□□ -2.03
LSM3P62310 RPL21P75-201ENST00000396599 483 ntBASIC2.36□□□□□ -2.03
LSM3P62310 RPL21P28-201ENST00000401418 483 ntBASIC2.36□□□□□ -2.03
LSM3P62310 AL592114.1-201ENST00000403842 483 ntBASIC2.36□□□□□ -2.03
LSM3P62310 RNA5SP492-201ENST00000411330 114 ntBASIC2.36□□□□□ -2.03
LSM3P62310 RPL19P1-201ENST00000411635 428 ntBASIC2.36□□□□□ -2.03
LSM3P62310 RPL31P2-201ENST00000413849 377 ntBASIC2.36□□□□□ -2.03
LSM3P62310 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.36□□□□□ -2.03
LSM3P62310 AC023128.2-201ENST00000420880 1223 ntBASIC2.36□□□□□ -2.03
LSM3P62310 AC244098.2-201ENST00000422068 99 ntBASIC2.36□□□□□ -2.03
LSM3P62310 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2.36□□□□□ -2.03
LSM3P62310 RPL21P40-201ENST00000428586 483 ntBASIC2.36□□□□□ -2.03
LSM3P62310 RPS20P5-201ENST00000434808 360 ntBASIC2.36□□□□□ -2.03
LSM3P62310 CR769767.1-201ENST00000436337 346 ntBASIC2.36□□□□□ -2.03
LSM3P62310 AC006028.1-201ENST00000438379 402 ntBASIC2.36□□□□□ -2.03
LSM3P62310 AC112653.1-201ENST00000443851 386 ntBASIC2.36□□□□□ -2.03
LSM3P62310 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.36□□□□□ -2.03
LSM3P62310 RPL21P39-201ENST00000463605 483 ntBASIC2.36□□□□□ -2.03
LSM3P62310 AC011979.1-201ENST00000472300 483 ntBASIC2.36□□□□□ -2.03
LSM3P62310 HMGN2P13-201ENST00000476476 274 ntBASIC2.36□□□□□ -2.03
LSM3P62310 RPL21P93-201ENST00000480465 489 ntBASIC2.36□□□□□ -2.03
LSM3P62310 AC233702.1-201ENST00000482905 502 ntBASIC2.36□□□□□ -2.03
LSM3P62310 HMGB1P38-201ENST00000490557 577 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms