Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SNORA70.17-201ENST00000516449 133 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC2.26□□□□□ -2.05
CKS1BP61024 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC2.26□□□□□ -2.05
CKS1BP61024 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.26□□□□□ -2.05
CKS1BP61024 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
CKS1BP61024 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC2.26□□□□□ -2.05
CKS1BP61024 OR8R1P-201ENST00000543943 764 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.26□□□□□ -2.05
CKS1BP61024 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC2.26□□□□□ -2.05
CKS1BP61024 GLUD1P4-201ENST00000590914 418 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 AC009570.1-201ENST00000609599 745 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 AC009464.1-201ENST00000615731 469 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 AL138880.2-201ENST00000616214 239 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 CYCSP41-201ENST00000616920 296 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 ZYXP1-201ENST00000617638 118 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 SNORD39.4-201ENST00000620099 78 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CKS1BP61024 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CKS1BP61024 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CKS1BP61024 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC2.25□□□□□ -2.05
CKS1BP61024 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.25□□□□□ -2.05
CKS1BP61024 AL359837.1-201ENST00000381357 287 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 PPIAP31-201ENST00000405422 495 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 RNU2-6P-201ENST00000411404 190 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 RPL26P37-201ENST00000411983 438 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 ATP5A1P2-201ENST00000412323 255 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.25□□□□□ -2.05
CKS1BP61024 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.25□□□□□ -2.05
CKS1BP61024 AC129850.1-201ENST00000436203 508 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 RPS29P7-201ENST00000439662 171 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.25□□□□□ -2.05
CKS1BP61024 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.25□□□□□ -2.05
CKS1BP61024 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.25□□□□□ -2.05
CKS1BP61024 AC091153.1-201ENST00000466297 402 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 RPL23AP11-201ENST00000475260 469 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
CKS1BP61024 AC004062.1-201ENST00000509926 645 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 RNU1-143P-201ENST00000516296 146 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 RNU4-18P-201ENST00000516751 149 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CKS1BP61024 OR4R1P-201ENST00000529879 463 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CKS1BP61024 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.25□□□□□ -2.05
CKS1BP61024 ELOCP31-201ENST00000540463 467 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 AL391156.1-201ENST00000554965 554 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.25□□□□□ -2.05
CKS1BP61024 MIR5194-201ENST00000582634 120 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 AC107982.3-201ENST00000584957 985 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.25□□□□□ -2.05
CKS1BP61024 ZNF92P3-201ENST00000596594 954 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 AC092474.3-201ENST00000603022 568 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 DUXAP3-201ENST00000603616 594 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 AC245389.1-201ENST00000605141 529 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.25□□□□□ -2.05
CKS1BP61024 U1.23-201ENST00000610293 146 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 uc_338.1-201ENST00000612113 180 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.25□□□□□ -2.05
CKS1BP61024 RNU1-68P-201ENST00000615382 146 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 AL356321.1-201ENST00000621360 228 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 U1.39-201ENST00000621562 146 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CKS1BP61024 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CKS1BP61024 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CKS1BP61024 AC093536.2-201ENST00000565257 1406 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 NSRP1P1-201ENST00000444067 1693 ntBASIC2.25□□□□□ -2.05
CKS1BP61024 Z82195.2-201ENST00000612348 18351 ntBASIC2.24□□□□□ -2.05
CKS1BP61024 ZNF519P1-201ENST00000449011 1626 ntBASIC2.24□□□□□ -2.05
CKS1BP61024 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.24□□□□□ -2.05
CKS1BP61024 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CKS1BP61024 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CKS1BP61024 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.24□□□□□ -2.05
CKS1BP61024 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
CKS1BP61024 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.24□□□□□ -2.05
CKS1BP61024 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CKS1BP61024 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.24□□□□□ -2.05
CKS1BP61024 AL035423.1-201ENST00000420331 213 ntBASIC2.24□□□□□ -2.05
CKS1BP61024 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CKS1BP61024 AL035458.1-201ENST00000433096 585 ntBASIC2.24□□□□□ -2.05
CKS1BP61024 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.24□□□□□ -2.05
CKS1BP61024 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.24□□□□□ -2.05
CKS1BP61024 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.24□□□□□ -2.05
CKS1BP61024 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.24□□□□□ -2.05
CKS1BP61024 HMGB1P48-201ENST00000446155 598 ntBASIC2.24□□□□□ -2.05
CKS1BP61024 PRDX3P3-201ENST00000447765 522 ntBASIC2.24□□□□□ -2.05
CKS1BP61024 AC115115.1-201ENST00000449927 248 ntBASIC2.24□□□□□ -2.05
CKS1BP61024 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.24□□□□□ -2.05
CKS1BP61024 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.24□□□□□ -2.05
CKS1BP61024 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.24□□□□□ -2.05
CKS1BP61024 RPL30P14-201ENST00000482744 348 ntBASIC2.24□□□□□ -2.05
CKS1BP61024 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.24□□□□□ -2.05
CKS1BP61024 AC104619.4-201ENST00000510773 249 ntBASIC2.24□□□□□ -2.05
CKS1BP61024 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.24□□□□□ -2.05
CKS1BP61024 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.24□□□□□ -2.05
CKS1BP61024 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.24□□□□□ -2.05
CKS1BP61024 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.24□□□□□ -2.05
CKS1BP61024 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.24□□□□□ -2.05
CKS1BP61024 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.24□□□□□ -2.05
CKS1BP61024 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms