Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
RHBDL3P58872 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RHBDL3P58872 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 RPL23AP29-201ENST00000397284 453 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 AL031679.1-201ENST00000400616 525 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 CYCSP19-201ENST00000411715 316 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 MTCYBP38-201ENST00000417160 1123 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 AL953862.1-201ENST00000423016 168 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.89□□□□□ -1.63
RHBDL3P58872 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.89□□□□□ -1.63
RHBDL3P58872 SNRPEP7-201ENST00000438350 220 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RHBDL3P58872 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.89□□□□□ -1.63
RHBDL3P58872 EXTL2P1-201ENST00000446218 416 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.89□□□□□ -1.63
RHBDL3P58872 AC091153.1-201ENST00000466297 402 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 RN7SL132P-201ENST00000478131 296 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 AC012158.1-204ENST00000483430 465 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 DEFB109F-201ENST00000491870 277 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.89□□□□□ -1.63
RHBDL3P58872 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.89□□□□□ -1.63
RHBDL3P58872 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.89□□□□□ -1.63
RHBDL3P58872 AC093853.1-201ENST00000515689 483 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.89□□□□□ -1.63
RHBDL3P58872 OR5D17P-201ENST00000531492 978 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 PDCL2P2-201ENST00000533651 189 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 CBX3P5-201ENST00000552017 521 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 CYCSP2-201ENST00000558168 301 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.89□□□□□ -1.63
RHBDL3P58872 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.89□□□□□ -1.63
RHBDL3P58872 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
RHBDL3P58872 AC007687.1-201ENST00000602704 304 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.89□□□□□ -1.63
RHBDL3P58872 AC006023.2-201ENST00000609916 167 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 AL590282.1-201ENST00000610379 1136 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 MIR6868-201ENST00000611215 58 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 AL357080.1-201ENST00000617394 239 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 MIR6500-201ENST00000622700 86 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RHBDL3P58872 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RHBDL3P58872 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RHBDL3P58872 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.89□□□□□ -1.63
RHBDL3P58872 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RHBDL3P58872 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RHBDL3P58872 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
RHBDL3P58872 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RHBDL3P58872 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RHBDL3P58872 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RHBDL3P58872 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
RHBDL3P58872 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.88□□□□□ -1.63
RHBDL3P58872 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RHBDL3P58872 USP8P1-201ENST00000494673 3183 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.88□□□□□ -1.63
RHBDL3P58872 RNA5SP235-201ENST00000365411 114 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.88□□□□□ -1.63
RHBDL3P58872 RNU6-213P-201ENST00000384051 104 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RHBDL3P58872 RN7SKP199-201ENST00000410325 305 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 RNU6-757P-201ENST00000410334 100 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 RN7SKP202-201ENST00000410439 330 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 RN7SKP159-201ENST00000410657 292 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.88□□□□□ -1.63
RHBDL3P58872 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
RHBDL3P58872 HMGB3P5-201ENST00000428894 612 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.88□□□□□ -1.63
RHBDL3P58872 MTND1P32-201ENST00000433043 938 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.88□□□□□ -1.63
RHBDL3P58872 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.88□□□□□ -1.63
RHBDL3P58872 RPS4XP4-201ENST00000443195 763 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.88□□□□□ -1.63
RHBDL3P58872 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.88□□□□□ -1.63
RHBDL3P58872 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.88□□□□□ -1.63
RHBDL3P58872 RPL21P104-201ENST00000464143 478 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
RHBDL3P58872 HMGB1P25-201ENST00000468402 607 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.88□□□□□ -1.63
RHBDL3P58872 AC146944.2-203ENST00000502493 354 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 COX7A2P2-201ENST00000505291 250 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 AC139495.1-202ENST00000513164 354 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 AC023632.4-201ENST00000517783 191 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.88□□□□□ -1.63
RHBDL3P58872 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.88□□□□□ -1.63
RHBDL3P58872 AC063950.1-201ENST00000552036 308 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.88□□□□□ -1.63
RHBDL3P58872 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.88□□□□□ -1.63
RHBDL3P58872 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.88□□□□□ -1.63
RHBDL3P58872 MIR3158-1-201ENST00000583596 81 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.88□□□□□ -1.63
RHBDL3P58872 AL606490.9-201ENST00000603331 271 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 AL451044.1-201ENST00000604867 238 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 AL049634.3-201ENST00000604968 457 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 AC064801.1-201ENST00000612025 407 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 AC018755.4-201ENST00000619715 454 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 CRYM-AS1-204ENST00000637983 556 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RHBDL3P58872 AC097504.1-201ENST00000515103 2415 ntBASIC4.88□□□□□ -1.63
RHBDL3P58872 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RHBDL3P58872 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RHBDL3P58872 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.88□□□□□ -1.63
RHBDL3P58872 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms