Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MIR449A-201ENST00000362113 91 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 SNORA7.2-201ENST00000364446 145 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN6P56747 RNU6-301P-201ENST00000384277 107 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 EIF5P1-201ENST00000400019 1231 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 RSL24D1P1-201ENST00000404972 493 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 AL353692.2-201ENST00000407054 335 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 AC007899.1-201ENST00000412776 775 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN6P56747 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 ARL2BPP3-201ENST00000421226 480 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 TRIM60P13-201ENST00000432350 1283 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 AC074367.1-201ENST00000438685 1125 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CLDN6P56747 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN6P56747 RN7SL863P-201ENST00000462370 296 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 RPL31P13-201ENST00000484151 370 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 NIPA2P2-201ENST00000496376 1083 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 RPL23AP55-201ENST00000498163 452 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN6P56747 AC110794.1-201ENST00000505816 425 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
CLDN6P56747 AC008885.2-201ENST00000509506 930 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN6P56747 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN6P56747 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN6P56747 MTND5P21-201ENST00000531961 522 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 AP005205.1-201ENST00000563503 508 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 MIR4504-201ENST00000577413 92 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN6P56747 STMN1P1-201ENST00000617809 440 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 U73479.1-201ENST00000618062 168 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 AL590240.3-201ENST00000621416 943 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 AC024595.1-201ENST00000623088 387 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN6P56747 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN6P56747 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN6P56747 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN6P56747 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CLDN6P56747 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN6P56747 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN6P56747 AC107081.3-201ENST00000612715 2034 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN6P56747 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.17□□□□□ -1.9
CLDN6P56747 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
CLDN6P56747 AC004944.1-201ENST00000517807 3059 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 RNU6-543P-201ENST00000362576 108 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 RNU6-252P-201ENST00000363232 107 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 MIR184-201ENST00000384962 84 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 SNORA48.8-201ENST00000391324 134 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CLDN6P56747 DSTNP4-201ENST00000399472 474 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 RN7SKP285-201ENST00000410137 318 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN6P56747 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN6P56747 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN6P56747 AL513175.1-201ENST00000431492 780 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 UBE2V1P5-201ENST00000440070 405 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 AC004865.1-201ENST00000442276 1003 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 HMGB3P14-201ENST00000494195 599 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN6P56747 HMGB3P15-201ENST00000507326 574 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN6P56747 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN6P56747 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN6P56747 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN6P56747 RN7SKP244-201ENST00000516513 307 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN6P56747 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN6P56747 MTCYBP41-201ENST00000528913 1123 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN6P56747 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.17□□□□□ -1.9
CLDN6P56747 CKS1BP1-201ENST00000555221 240 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 MTCYBP28-201ENST00000566728 1132 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN6P56747 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN6P56747 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.17□□□□□ -1.9
CLDN6P56747 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN6P56747 AC006539.2-201ENST00000601729 572 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 AC091488.1-201ENST00000604239 660 ntBASIC3.17□□□□□ -1.9
CLDN6P56747 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.17□□□□□ -1.9
CLDN6P56747 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN6P56747 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN6P56747 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN6P56747 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN6P56747 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CLDN6P56747 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CLDN6P56747 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN6P56747 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN6P56747 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN6P56747 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CLDN6P56747 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN6P56747 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
CLDN6P56747 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN6P56747 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN6P56747 AC046144.1-201ENST00000478559 1853 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 AP001148.1-201ENST00000624124 2359 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms