Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 AC025588.4-201ENST00000615802 908 ntBASIC3.39□□□□□ -1.87
PAX9P55771 AC009090.3-201ENST00000616553 565 ntBASIC3.39□□□□□ -1.87
PAX9P55771 RN7SL722P-201ENST00000617780 284 ntBASIC3.39□□□□□ -1.87
PAX9P55771 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.39□□□□□ -1.87
PAX9P55771 RN7SL565P-201ENST00000618246 284 ntBASIC3.39□□□□□ -1.87
PAX9P55771 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.39□□□□□ -1.87
PAX9P55771 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.39□□□□□ -1.87
PAX9P55771 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.39□□□□□ -1.87
PAX9P55771 ELL2P3-201ENST00000457883 1602 ntBASIC3.39□□□□□ -1.87
PAX9P55771 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PAX9P55771 CR381670.1-201ENST00000624291 1693 ntBASIC3.39□□□□□ -1.87
PAX9P55771 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
PAX9P55771 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PAX9P55771 MTCO1P23-201ENST00000415223 1526 ntBASIC3.39□□□□□ -1.87
PAX9P55771 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PAX9P55771 DDX43P2-201ENST00000604753 1354 ntBASIC3.38□□□□□ -1.87
PAX9P55771 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.38□□□□□ -1.87
PAX9P55771 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PAX9P55771 BDP1P-201ENST00000582658 1990 ntBASIC3.38□□□□□ -1.87
PAX9P55771 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.38□□□□□ -1.87
PAX9P55771 RNU6-777P-201ENST00000364265 104 ntBASIC3.38□□□□□ -1.87
PAX9P55771 RNU6-730P-201ENST00000383954 104 ntBASIC3.38□□□□□ -1.87
PAX9P55771 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PAX9P55771 AC007066.1-201ENST00000392902 381 ntBASIC3.38□□□□□ -1.87
PAX9P55771 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.38□□□□□ -1.87
PAX9P55771 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.38□□□□□ -1.87
PAX9P55771 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PAX9P55771 BRWD1P3-201ENST00000428816 390 ntBASIC3.38□□□□□ -1.87
PAX9P55771 USP9YP9-201ENST00000429406 715 ntBASIC3.38□□□□□ -1.87
PAX9P55771 AL772161.1-201ENST00000439130 476 ntBASIC3.38□□□□□ -1.87
PAX9P55771 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.38□□□□□ -1.87
PAX9P55771 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.38□□□□□ -1.87
PAX9P55771 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.38□□□□□ -1.87
PAX9P55771 RPL36AP15-201ENST00000444514 266 ntBASIC3.38□□□□□ -1.87
PAX9P55771 AL162591.2-201ENST00000449634 317 ntBASIC3.38□□□□□ -1.87
PAX9P55771 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.38□□□□□ -1.87
PAX9P55771 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.38□□□□□ -1.87
PAX9P55771 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.38□□□□□ -1.87
PAX9P55771 PLGLA-201ENST00000465668 449 ntBASIC3.38□□□□□ -1.87
PAX9P55771 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.38□□□□□ -1.87
PAX9P55771 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.38□□□□□ -1.87
PAX9P55771 AC012170.1-201ENST00000495139 359 ntBASIC3.38□□□□□ -1.87
PAX9P55771 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.38□□□□□ -1.87
PAX9P55771 AC093767.1-201ENST00000504523 156 ntBASIC3.38□□□□□ -1.87
PAX9P55771 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.38□□□□□ -1.87
PAX9P55771 AC117532.1-201ENST00000514638 323 ntBASIC3.38□□□□□ -1.87
PAX9P55771 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PAX9P55771 SNORA70.14-201ENST00000516205 110 ntBASIC3.38□□□□□ -1.87
PAX9P55771 IGKV2D-36-201ENST00000518643 226 ntBASIC3.38□□□□□ -1.87
PAX9P55771 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.38□□□□□ -1.87
PAX9P55771 AC087276.1-201ENST00000529659 480 ntBASIC3.38□□□□□ -1.87
PAX9P55771 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.38□□□□□ -1.87
PAX9P55771 AP006289.1-201ENST00000538089 277 ntBASIC3.38□□□□□ -1.87
PAX9P55771 AC137768.1-201ENST00000549998 553 ntBASIC3.38□□□□□ -1.87
PAX9P55771 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.38□□□□□ -1.87
PAX9P55771 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.38□□□□□ -1.87
PAX9P55771 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.38□□□□□ -1.87
PAX9P55771 OR4G1P-201ENST00000588632 938 ntBASIC3.38□□□□□ -1.87
PAX9P55771 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.38□□□□□ -1.87
PAX9P55771 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.38□□□□□ -1.87
PAX9P55771 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.38□□□□□ -1.87
PAX9P55771 AC007566.2-201ENST00000603642 413 ntBASIC3.38□□□□□ -1.87
PAX9P55771 AC010680.4-201ENST00000605334 543 ntBASIC3.38□□□□□ -1.87
PAX9P55771 FAM25E-202ENST00000608562 189 ntBASIC3.38□□□□□ -1.87
PAX9P55771 AL133243.1-201ENST00000614487 366 ntBASIC3.38□□□□□ -1.87
PAX9P55771 AL356596.1-201ENST00000624230 379 ntBASIC3.38□□□□□ -1.87
PAX9P55771 AL773545.4-201ENST00000637262 310 ntBASIC3.38□□□□□ -1.87
PAX9P55771 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.38□□□□□ -1.87
PAX9P55771 AL513478.4-201ENST00000641636 310 ntBASIC3.38□□□□□ -1.87
PAX9P55771 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PAX9P55771 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.38□□□□□ -1.87
PAX9P55771 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
PAX9P55771 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.37□□□□□ -1.87
PAX9P55771 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PAX9P55771 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PAX9P55771 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PAX9P55771 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PAX9P55771 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PAX9P55771 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PAX9P55771 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PAX9P55771 RNU6-343P-201ENST00000364709 104 ntBASIC3.37□□□□□ -1.87
PAX9P55771 SNORD6-201ENST00000365444 73 ntBASIC3.37□□□□□ -1.87
PAX9P55771 RNU6-723P-201ENST00000383973 107 ntBASIC3.37□□□□□ -1.87
PAX9P55771 SNORD116-9-201ENST00000384000 95 ntBASIC3.37□□□□□ -1.87
PAX9P55771 SNORD116-3-201ENST00000384287 95 ntBASIC3.37□□□□□ -1.87
PAX9P55771 SNORD116-7-201ENST00000384404 95 ntBASIC3.37□□□□□ -1.87
PAX9P55771 SNORD116-5-201ENST00000384462 95 ntBASIC3.37□□□□□ -1.87
PAX9P55771 RNU6-952P-201ENST00000391164 108 ntBASIC3.37□□□□□ -1.87
PAX9P55771 RPL31P1-201ENST00000398116 372 ntBASIC3.37□□□□□ -1.87
PAX9P55771 AL583835.1-201ENST00000399570 407 ntBASIC3.37□□□□□ -1.87
PAX9P55771 AL049697.2-201ENST00000403708 294 ntBASIC3.37□□□□□ -1.87
PAX9P55771 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.37□□□□□ -1.87
PAX9P55771 MIR1179-201ENST00000408703 91 ntBASIC3.37□□□□□ -1.87
PAX9P55771 TPMTP3-201ENST00000411928 735 ntBASIC3.37□□□□□ -1.87
PAX9P55771 RPL23AP39-201ENST00000415533 405 ntBASIC3.37□□□□□ -1.87
PAX9P55771 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.37□□□□□ -1.87
PAX9P55771 NPM1P11-201ENST00000417106 855 ntBASIC3.37□□□□□ -1.87
PAX9P55771 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.37□□□□□ -1.87
PAX9P55771 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.37□□□□□ -1.87
PAX9P55771 AC092832.1-201ENST00000422934 400 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms