Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 Z99714.1-201ENST00000450463 807 ntBASIC3.46□□□□□ -1.86
CDH4P55283 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDH4P55283 RPL12P26-201ENST00000452430 487 ntBASIC3.46□□□□□ -1.86
CDH4P55283 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH4P55283 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH4P55283 SYPL1P1-201ENST00000473622 768 ntBASIC3.46□□□□□ -1.86
CDH4P55283 RPL32P34-201ENST00000486380 400 ntBASIC3.46□□□□□ -1.86
CDH4P55283 RPL21P13-201ENST00000488305 481 ntBASIC3.46□□□□□ -1.86
CDH4P55283 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH4P55283 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH4P55283 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH4P55283 AC074250.1-201ENST00000511117 192 ntBASIC3.46□□□□□ -1.86
CDH4P55283 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH4P55283 AC107934.2-201ENST00000518653 310 ntBASIC3.46□□□□□ -1.86
CDH4P55283 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH4P55283 HIGD1AP6-201ENST00000521833 279 ntBASIC3.46□□□□□ -1.86
CDH4P55283 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH4P55283 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH4P55283 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH4P55283 CR383656.14-201ENST00000551951 406 ntBASIC3.46□□□□□ -1.86
CDH4P55283 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH4P55283 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.46□□□□□ -1.86
CDH4P55283 MIR4276-201ENST00000584832 70 ntBASIC3.46□□□□□ -1.86
CDH4P55283 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH4P55283 SRGNP1-201ENST00000603392 451 ntBASIC3.46□□□□□ -1.86
CDH4P55283 AC099778.2-201ENST00000610904 211 ntBASIC3.46□□□□□ -1.86
CDH4P55283 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH4P55283 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH4P55283 Z83843.1-201ENST00000604070 3685 ntBASIC3.46□□□□□ -1.86
CDH4P55283 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH4P55283 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH4P55283 PWAR6-201ENST00000552334 4618 ntBASIC3.46□□□□□ -1.86
CDH4P55283 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH4P55283 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH4P55283 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CDH4P55283 CR383658.2-201ENST00000547576 1525 ntBASIC3.45□□□□□ -1.86
CDH4P55283 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDH4P55283 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDH4P55283 MIR16-2-201ENST00000362117 81 ntBASIC3.45□□□□□ -1.86
CDH4P55283 SNORD46.1-201ENST00000364139 104 ntBASIC3.45□□□□□ -1.86
CDH4P55283 RNU6-1226P-201ENST00000384317 107 ntBASIC3.45□□□□□ -1.86
CDH4P55283 RNVU1-14-201ENST00000384770 164 ntBASIC3.45□□□□□ -1.86
CDH4P55283 MT-TC-201ENST00000387405 66 ntBASIC3.45□□□□□ -1.86
CDH4P55283 RNU6-77P-201ENST00000410554 91 ntBASIC3.45□□□□□ -1.86
CDH4P55283 RPL30P2-201ENST00000414021 291 ntBASIC3.45□□□□□ -1.86
CDH4P55283 AL158156.1-201ENST00000422509 473 ntBASIC3.45□□□□□ -1.86
CDH4P55283 RPF2P1-201ENST00000424137 906 ntBASIC3.45□□□□□ -1.86
CDH4P55283 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH4P55283 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH4P55283 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH4P55283 BTBD7P2-201ENST00000441962 620 ntBASIC3.45□□□□□ -1.86
CDH4P55283 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH4P55283 AL929288.2-201ENST00000446368 407 ntBASIC3.45□□□□□ -1.86
CDH4P55283 RPS4XP2-201ENST00000458402 793 ntBASIC3.45□□□□□ -1.86
CDH4P55283 PLGLA-201ENST00000465668 449 ntBASIC3.45□□□□□ -1.86
CDH4P55283 RPL21P47-201ENST00000483696 477 ntBASIC3.45□□□□□ -1.86
CDH4P55283 AL358832.1-201ENST00000497800 389 ntBASIC3.45□□□□□ -1.86
CDH4P55283 AC020893.1-201ENST00000502452 580 ntBASIC3.45□□□□□ -1.86
CDH4P55283 HSPD1P15-201ENST00000505573 1122 ntBASIC3.45□□□□□ -1.86
CDH4P55283 HMGB3P15-201ENST00000507326 574 ntBASIC3.45□□□□□ -1.86
CDH4P55283 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH4P55283 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH4P55283 IGJP1-201ENST00000522682 475 ntBASIC3.45□□□□□ -1.86
CDH4P55283 AC004217.3-201ENST00000551552 878 ntBASIC3.45□□□□□ -1.86
CDH4P55283 SNRPGP1-201ENST00000553864 222 ntBASIC3.45□□□□□ -1.86
CDH4P55283 AC023824.3-201ENST00000569003 562 ntBASIC3.45□□□□□ -1.86
CDH4P55283 CCDC58P3-201ENST00000590792 430 ntBASIC3.45□□□□□ -1.86
CDH4P55283 AL671309.1-201ENST00000603750 544 ntBASIC3.45□□□□□ -1.86
CDH4P55283 AL118556.2-201ENST00000614375 824 ntBASIC3.45□□□□□ -1.86
CDH4P55283 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH4P55283 AL356321.1-201ENST00000621360 228 ntBASIC3.45□□□□□ -1.86
CDH4P55283 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH4P55283 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH4P55283 MTCO1P6-201ENST00000481192 1384 ntBASIC3.45□□□□□ -1.86
CDH4P55283 AC025263.3-201ENST00000622965 1396 ntBASIC3.45□□□□□ -1.86
CDH4P55283 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH4P55283 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDH4P55283 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH4P55283 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CDH4P55283 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH4P55283 AC005183.1-201ENST00000603687 1979 ntBASIC3.44□□□□□ -1.86
CDH4P55283 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CDH4P55283 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CDH4P55283 RNU6-263P-201ENST00000363811 107 ntBASIC3.44□□□□□ -1.86
CDH4P55283 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH4P55283 AL158050.1-201ENST00000416077 457 ntBASIC3.44□□□□□ -1.86
CDH4P55283 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH4P55283 RPS3AP9-201ENST00000417027 792 ntBASIC3.44□□□□□ -1.86
CDH4P55283 AIMP1P1-201ENST00000418670 937 ntBASIC3.44□□□□□ -1.86
CDH4P55283 MTCO1P43-201ENST00000431831 488 ntBASIC3.44□□□□□ -1.86
CDH4P55283 SETP5-201ENST00000437270 562 ntBASIC3.44□□□□□ -1.86
CDH4P55283 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH4P55283 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH4P55283 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH4P55283 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.44□□□□□ -1.86
CDH4P55283 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH4P55283 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDH4P55283 RPL7P55-201ENST00000450522 746 ntBASIC3.44□□□□□ -1.86
CDH4P55283 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH4P55283 RPS4XP10-201ENST00000465034 731 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms