Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ZNF603P-201ENST00000405613 487 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 AL133384.1-201ENST00000412744 351 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 MTND4P22-201ENST00000413116 1169 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 AC073136.2-201ENST00000417282 849 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 RPL36P19-201ENST00000430744 301 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 AL050321.1-201ENST00000432363 400 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLCN3P51790 EXTL2P1-201ENST00000446218 416 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCN3P51790 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCN3P51790 ART2BP-201ENST00000453501 499 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCN3P51790 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.22□□□□□ -1.73
CLCN3P51790 MTCO3P2-201ENST00000457365 171 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCN3P51790 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.22□□□□□ -1.73
CLCN3P51790 AC116353.3-201ENST00000511215 249 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.22□□□□□ -1.73
CLCN3P51790 AC104057.1-201ENST00000515547 497 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 RNA5SP154-201ENST00000516193 111 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 PAICSP4-201ENST00000517543 1253 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCN3P51790 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCN3P51790 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.22□□□□□ -1.73
CLCN3P51790 TRAV15-201ENST00000556680 249 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCN3P51790 MIR4504-201ENST00000577413 92 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 PIGPP4-201ENST00000584447 307 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CLCN3P51790 AL158196.1-201ENST00000616786 434 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 LINC00901.1-201ENST00000617252 152 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 AC121761.2-201ENST00000617300 689 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.22□□□□□ -1.73
CLCN3P51790 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.22□□□□□ -1.73
CLCN3P51790 ELL2P4-201ENST00000446870 1376 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 AC024560.2-201ENST00000507981 1497 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 CDR1-202ENST00000625883 1485 ntBASIC4.22□□□□□ -1.73
CLCN3P51790 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
CLCN3P51790 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.21□□□□□ -1.73
CLCN3P51790 AC104454.1-201ENST00000421341 1401 ntBASIC4.21□□□□□ -1.73
CLCN3P51790 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.21□□□□□ -1.73
CLCN3P51790 ZNF33CP-201ENST00000432492 2030 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLCN3P51790 Y_RNA.25-201ENST00000362528 102 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLCN3P51790 MIR93-201ENST00000385024 80 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 MIR513A2-201ENST00000385249 127 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 SOD2P1-201ENST00000396543 562 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 RSL24D1P4-201ENST00000400938 484 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.21□□□□□ -1.74
CLCN3P51790 RNU2-42P-201ENST00000410697 113 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.21□□□□□ -1.74
CLCN3P51790 AL139421.1-201ENST00000423010 169 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 SDCBPP2-201ENST00000424643 885 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 AL451062.2-201ENST00000427515 271 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 ATP5F1P1-201ENST00000433775 569 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.21□□□□□ -1.74
CLCN3P51790 AL008629.1-201ENST00000438615 184 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 MTCO1P48-201ENST00000448024 1096 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.21□□□□□ -1.74
CLCN3P51790 ANKRD26P4-201ENST00000455755 950 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 UBDP1-202ENST00000457888 382 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.21□□□□□ -1.74
CLCN3P51790 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.21□□□□□ -1.74
CLCN3P51790 RNF138P1-201ENST00000502765 546 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 AC118465.1-201ENST00000513820 1271 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.21□□□□□ -1.74
CLCN3P51790 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.21□□□□□ -1.74
CLCN3P51790 HIGD1AP17-201ENST00000554576 276 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 AC138915.2-201ENST00000569776 97 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.21□□□□□ -1.74
CLCN3P51790 AL354943.1-201ENST00000572103 781 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.21□□□□□ -1.74
CLCN3P51790 AC133552.5-201ENST00000604266 540 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 Z94722.1-201ENST00000604328 474 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 DPRXP5-201ENST00000604662 539 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 AL049634.3-201ENST00000604968 457 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 AC080013.3-201ENST00000606839 578 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.21□□□□□ -1.74
CLCN3P51790 AP003392.5-201ENST00000607857 415 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 AC245008.1-201ENST00000608123 476 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.21□□□□□ -1.74
CLCN3P51790 AC067852.7-201ENST00000623270 535 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 MIR3974-201ENST00000637126 96 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.21□□□□□ -1.74
CLCN3P51790 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLCN3P51790 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLCN3P51790 AC068254.2-201ENST00000623938 3577 ntBASIC4.21□□□□□ -1.74
CLCN3P51790 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CLCN3P51790 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLCN3P51790 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLCN3P51790 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLCN3P51790 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLCN3P51790 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLCN3P51790 AP000776.1-201ENST00000530032 1663 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLCN3P51790 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLCN3P51790 RNU6-216P-201ENST00000363282 104 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCN3P51790 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms