Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 NPM1P13-201ENST00000452663 865 ntBASIC2.1□□□□□ -2.07
CKS2P33552 RN7SL863P-201ENST00000462370 296 ntBASIC2.1□□□□□ -2.07
CKS2P33552 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.1□□□□□ -2.07
CKS2P33552 AC104472.2-201ENST00000469035 601 ntBASIC2.1□□□□□ -2.07
CKS2P33552 AC020898.1-201ENST00000474167 787 ntBASIC2.1□□□□□ -2.07
CKS2P33552 AC073522.1-201ENST00000483312 377 ntBASIC2.1□□□□□ -2.07
CKS2P33552 RPL21P131-201ENST00000497298 483 ntBASIC2.1□□□□□ -2.07
CKS2P33552 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.1□□□□□ -2.07
CKS2P33552 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.1□□□□□ -2.07
CKS2P33552 AC021146.7-201ENST00000509604 775 ntBASIC2.1□□□□□ -2.07
CKS2P33552 AC026412.2-201ENST00000512270 1075 ntBASIC2.1□□□□□ -2.07
CKS2P33552 TBCAP3-201ENST00000512475 312 ntBASIC2.1□□□□□ -2.07
CKS2P33552 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.1□□□□□ -2.07
CKS2P33552 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.1□□□□□ -2.07
CKS2P33552 OR4A45P-201ENST00000529954 901 ntBASIC2.1□□□□□ -2.07
CKS2P33552 HPRT1P3-201ENST00000539521 576 ntBASIC2.1□□□□□ -2.07
CKS2P33552 NCAPGP2-201ENST00000557911 754 ntBASIC2.1□□□□□ -2.07
CKS2P33552 AC007224.1-201ENST00000564410 144 ntBASIC2.1□□□□□ -2.07
CKS2P33552 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.1□□□□□ -2.07
CKS2P33552 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CKS2P33552 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.1□□□□□ -2.07
CKS2P33552 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.1□□□□□ -2.07
CKS2P33552 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.1□□□□□ -2.07
CKS2P33552 AC073387.2-201ENST00000604797 784 ntBASIC2.1□□□□□ -2.07
CKS2P33552 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.1□□□□□ -2.07
CKS2P33552 AL355365.1-201ENST00000616480 294 ntBASIC2.1□□□□□ -2.07
CKS2P33552 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.1□□□□□ -2.07
CKS2P33552 MIR6758-201ENST00000620653 63 ntBASIC2.1□□□□□ -2.07
CKS2P33552 AC091953.5-201ENST00000622919 233 ntBASIC2.1□□□□□ -2.07
CKS2P33552 AC020923.1-201ENST00000624021 917 ntBASIC2.1□□□□□ -2.07
CKS2P33552 AC139713.2-210ENST00000641741 992 ntBASIC2.1□□□□□ -2.07
CKS2P33552 AC233263.6-201ENST00000631132 1963 ntBASIC2.1□□□□□ -2.07
CKS2P33552 AL136520.1-201ENST00000600311 1322 ntBASIC2.1□□□□□ -2.07
CKS2P33552 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.1□□□□□ -2.07
CKS2P33552 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
CKS2P33552 ZNF37BP-203ENST00000452306 1352 ntBASIC2.1□□□□□ -2.07
CKS2P33552 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CKS2P33552 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CKS2P33552 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.09□□□□□ -2.07
CKS2P33552 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.09□□□□□ -2.07
CKS2P33552 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CKS2P33552 VTRNA1-1-201ENST00000363120 99 ntBASIC2.09□□□□□ -2.07
CKS2P33552 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CKS2P33552 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CKS2P33552 CD24P4-201ENST00000382840 243 ntBASIC2.09□□□□□ -2.07
CKS2P33552 RNU1-109P-201ENST00000383960 147 ntBASIC2.09□□□□□ -2.07
CKS2P33552 MIR1289-1-201ENST00000408836 144 ntBASIC2.09□□□□□ -2.07
CKS2P33552 AC234782.4-201ENST00000417646 1048 ntBASIC2.09□□□□□ -2.07
CKS2P33552 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.09□□□□□ -2.07
CKS2P33552 BTF3P9-201ENST00000418784 283 ntBASIC2.09□□□□□ -2.07
CKS2P33552 RPF2P1-201ENST00000424137 906 ntBASIC2.09□□□□□ -2.07
CKS2P33552 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.09□□□□□ -2.07
CKS2P33552 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.09□□□□□ -2.07
CKS2P33552 BRWD1P3-201ENST00000428816 390 ntBASIC2.09□□□□□ -2.07
CKS2P33552 AL606490.7-201ENST00000433136 191 ntBASIC2.09□□□□□ -2.07
CKS2P33552 RPS7P2-201ENST00000435134 607 ntBASIC2.09□□□□□ -2.07
CKS2P33552 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.09□□□□□ -2.07
CKS2P33552 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.09□□□□□ -2.07
CKS2P33552 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CKS2P33552 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC2.09□□□□□ -2.07
CKS2P33552 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.09□□□□□ -2.07
CKS2P33552 snoU13.7-201ENST00000459220 104 ntBASIC2.09□□□□□ -2.07
CKS2P33552 RPL7P15-201ENST00000461190 712 ntBASIC2.09□□□□□ -2.07
CKS2P33552 RPL21P10-201ENST00000463521 490 ntBASIC2.09□□□□□ -2.07
CKS2P33552 RN7SL385P-201ENST00000468873 276 ntBASIC2.09□□□□□ -2.07
CKS2P33552 NDUFA5P9-201ENST00000472609 340 ntBASIC2.09□□□□□ -2.07
CKS2P33552 AC091959.2-201ENST00000477363 321 ntBASIC2.09□□□□□ -2.07
CKS2P33552 AC090525.1-201ENST00000479116 478 ntBASIC2.09□□□□□ -2.07
CKS2P33552 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CKS2P33552 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CKS2P33552 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.09□□□□□ -2.07
CKS2P33552 RNA5SP468-201ENST00000516782 93 ntBASIC2.09□□□□□ -2.07
CKS2P33552 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.09□□□□□ -2.07
CKS2P33552 CDH12P4-201ENST00000517835 295 ntBASIC2.09□□□□□ -2.07
CKS2P33552 CDH12P3-201ENST00000517935 295 ntBASIC2.09□□□□□ -2.07
CKS2P33552 CDH12P1-201ENST00000518435 295 ntBASIC2.09□□□□□ -2.07
CKS2P33552 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.09□□□□□ -2.07
CKS2P33552 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.09□□□□□ -2.07
CKS2P33552 AL133271.1-201ENST00000538229 291 ntBASIC2.09□□□□□ -2.07
CKS2P33552 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.09□□□□□ -2.07
CKS2P33552 AC005242.1-201ENST00000585658 438 ntBASIC2.09□□□□□ -2.07
CKS2P33552 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.09□□□□□ -2.07
CKS2P33552 CKS1BP3-201ENST00000600888 237 ntBASIC2.09□□□□□ -2.07
CKS2P33552 AL356575.1-201ENST00000603008 283 ntBASIC2.09□□□□□ -2.07
CKS2P33552 DUXAP4-201ENST00000603046 613 ntBASIC2.09□□□□□ -2.07
CKS2P33552 AC096947.1-201ENST00000603233 470 ntBASIC2.09□□□□□ -2.07
CKS2P33552 AL590392.1-201ENST00000604960 446 ntBASIC2.09□□□□□ -2.07
CKS2P33552 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.09□□□□□ -2.07
CKS2P33552 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.08
CKS2P33552 DPY19L2P2-203ENST00000435536 1858 ntBASIC2.09□□□□□ -2.08
CKS2P33552 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.09□□□□□ -2.08
CKS2P33552 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CKS2P33552 AL035425.3-201ENST00000564206 4996 ntBASIC2.09□□□□□ -2.08
CKS2P33552 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CKS2P33552 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.08□□□□□ -2.08
CKS2P33552 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CKS2P33552 FAM35BP-202ENST00000497389 3337 ntBASIC2.08□□□□□ -2.08
CKS2P33552 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CKS2P33552 SNORA9.2-201ENST00000365361 133 ntBASIC2.08□□□□□ -2.08
CKS2P33552 SNORD21-201ENST00000383953 95 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms