Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXA13P31271 AP000619.3-201ENST00000535634 1127 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA13P31271 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA13P31271 CCNG2P1-201ENST00000549521 1000 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA13P31271 AC090695.1-201ENST00000561269 1222 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 AC091057.2-201ENST00000602594 792 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 AC022022.2-201ENST00000602989 360 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 AC008638.3-201ENST00000603341 463 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 AC024220.1-201ENST00000603675 484 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXA13P31271 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXA13P31271 AC022079.1-201ENST00000621546 602 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 AP002782.1-201ENST00000623107 614 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 AC067852.7-201ENST00000623270 535 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA13P31271 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA13P31271 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HOXA13P31271 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXA13P31271 AC007823.1-201ENST00000569932 1566 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA13P31271 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HOXA13P31271 AC117529.2-201ENST00000512159 2068 ntBASIC4.22□□□□□ -1.73
HOXA13P31271 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.21□□□□□ -1.73
HOXA13P31271 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXA13P31271 Y_RNA.25-201ENST00000362528 102 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 RNU6-251P-201ENST00000363235 104 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 RNU6-560P-201ENST00000364007 108 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 HLFP1-201ENST00000402375 499 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 ATP5A1P2-201ENST00000412323 255 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 MTND4P22-201ENST00000413116 1169 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 AC068533.1-201ENST00000418542 415 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 XKRYP1-201ENST00000423438 492 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXA13P31271 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXA13P31271 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXA13P31271 YME1L1P1-201ENST00000429435 297 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXA13P31271 XKRYP2-201ENST00000432915 492 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 ATP5F1P1-201ENST00000433775 569 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 HSPD1P21-201ENST00000436541 245 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXA13P31271 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.21□□□□□ -1.74
HOXA13P31271 NECAP1P2-201ENST00000455668 727 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXA13P31271 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXA13P31271 S100A11P1-201ENST00000477525 312 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 AC106707.2-201ENST00000484182 374 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXA13P31271 RNF138P1-201ENST00000502765 546 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 AC104057.1-201ENST00000515547 497 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 RN7SKP18-201ENST00000516005 275 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXA13P31271 IGKV2D-19-201ENST00000523346 262 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXA13P31271 AC005832.3-201ENST00000537929 631 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.21□□□□□ -1.74
HOXA13P31271 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXA13P31271 AC006960.3-201ENST00000561845 705 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXA13P31271 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXA13P31271 AC010680.3-201ENST00000604215 520 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 AC115621.1-201ENST00000604653 858 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 AC009464.1-201ENST00000615731 469 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 AC244100.1-202ENST00000621554 382 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 AC068057.2-201ENST00000624047 895 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 AP000676.4-201ENST00000624659 623 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 AL356121.2-201ENST00000624715 780 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 AC092184.1-201ENST00000625042 715 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 MKKS-204ENST00000639674 192 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HOXA13P31271 ZNF876P-202ENST00000398732 1485 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXA13P31271 AC011978.2-201ENST00000569835 2054 ntBASIC4.21□□□□□ -1.74
HOXA13P31271 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA13P31271 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXA13P31271 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA13P31271 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HOXA13P31271 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXA13P31271 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXA13P31271 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA13P31271 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXA13P31271 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA13P31271 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXA13P31271 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA13P31271 OR10J6P-201ENST00000289731 930 ntBASIC4.2□□□□□ -1.74
HOXA13P31271 AC007685.1-201ENST00000329806 452 ntBASIC4.2□□□□□ -1.74
HOXA13P31271 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXA13P31271 SNORA70E-201ENST00000384492 135 ntBASIC4.2□□□□□ -1.74
HOXA13P31271 MIR124-3-201ENST00000384866 87 ntBASIC4.2□□□□□ -1.74
HOXA13P31271 ATP5F1P4-201ENST00000397288 746 ntBASIC4.2□□□□□ -1.74
HOXA13P31271 RPS29P4-201ENST00000414733 161 ntBASIC4.2□□□□□ -1.74
HOXA13P31271 AC245054.1-201ENST00000420944 258 ntBASIC4.2□□□□□ -1.74
HOXA13P31271 RPL7P44-201ENST00000424827 742 ntBASIC4.2□□□□□ -1.74
HOXA13P31271 CETN4P-201ENST00000432407 469 ntBASIC4.2□□□□□ -1.74
HOXA13P31271 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXA13P31271 Z77249.1-201ENST00000444622 1175 ntBASIC4.2□□□□□ -1.74
HOXA13P31271 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms