Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TNFSF4P23510 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.28□□□□□ -1.72
TNFSF4P23510 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.28□□□□□ -1.72
TNFSF4P23510 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.28□□□□□ -1.72
TNFSF4P23510 AC103987.3-201ENST00000582071 292 ntBASIC4.28□□□□□ -1.72
TNFSF4P23510 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.28□□□□□ -1.72
TNFSF4P23510 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.28□□□□□ -1.72
TNFSF4P23510 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.28□□□□□ -1.72
TNFSF4P23510 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.28□□□□□ -1.72
TNFSF4P23510 AC121334.2-201ENST00000605387 271 ntBASIC4.28□□□□□ -1.72
TNFSF4P23510 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.28□□□□□ -1.72
TNFSF4P23510 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.28□□□□□ -1.72
TNFSF4P23510 AL590282.1-201ENST00000610379 1136 ntBASIC4.28□□□□□ -1.72
TNFSF4P23510 AC131902.3-201ENST00000611767 581 ntBASIC4.28□□□□□ -1.72
TNFSF4P23510 AC009509.4-201ENST00000619202 509 ntBASIC4.28□□□□□ -1.72
TNFSF4P23510 AC012150.2-201ENST00000621300 544 ntBASIC4.28□□□□□ -1.72
TNFSF4P23510 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.28□□□□□ -1.72
TNFSF4P23510 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TNFSF4P23510 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.28□□□□□ -1.72
TNFSF4P23510 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TNFSF4P23510 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.28□□□□□ -1.72
TNFSF4P23510 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
TNFSF4P23510 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
TNFSF4P23510 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.27□□□□□ -1.73
TNFSF4P23510 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TNFSF4P23510 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TNFSF4P23510 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.27□□□□□ -1.73
TNFSF4P23510 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TNFSF4P23510 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TNFSF4P23510 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.27□□□□□ -1.73
TNFSF4P23510 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TNFSF4P23510 XIAPP3-201ENST00000312918 795 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 SNORA51.2-201ENST00000364595 132 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
TNFSF4P23510 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TNFSF4P23510 RNU6-637P-201ENST00000384050 107 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 SNORA70.10-201ENST00000384515 134 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 RNU6-882P-201ENST00000391025 103 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 OR6C69P-201ENST00000394268 893 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.27□□□□□ -1.73
TNFSF4P23510 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.27□□□□□ -1.73
TNFSF4P23510 RBMY2QP-201ENST00000429799 1147 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 RPS6P12-201ENST00000432491 726 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 PTMAP6-201ENST00000439110 327 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.27□□□□□ -1.73
TNFSF4P23510 RAC1P7-201ENST00000445367 377 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.27□□□□□ -1.73
TNFSF4P23510 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.27□□□□□ -1.73
TNFSF4P23510 AC007967.1-201ENST00000455422 1159 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 snoU13.20-201ENST00000459180 104 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 LARP1BP2-201ENST00000486594 519 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 AC004453.1-201ENST00000487895 408 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 AC055855.1-201ENST00000489563 579 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TNFSF4P23510 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.27□□□□□ -1.73
TNFSF4P23510 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.27□□□□□ -1.73
TNFSF4P23510 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.27□□□□□ -1.73
TNFSF4P23510 AC026801.2-201ENST00000515352 425 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 AC022616.6-201ENST00000520479 119 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.27□□□□□ -1.73
TNFSF4P23510 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
TNFSF4P23510 RPL21P5-201ENST00000554662 472 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 AL356432.3-201ENST00000568952 465 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TNFSF4P23510 AC009977.1-201ENST00000586015 570 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.27□□□□□ -1.73
TNFSF4P23510 AP001429.1-201ENST00000602568 530 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 AC004908.2-201ENST00000609090 574 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 AC100793.4-201ENST00000613683 429 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 AC008250.2-201ENST00000615261 205 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
TNFSF4P23510 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TNFSF4P23510 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.27□□□□□ -1.73
TNFSF4P23510 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TNFSF4P23510 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TNFSF4P23510 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.27□□□□□ -1.73
TNFSF4P23510 AC116096.1-201ENST00000566804 2314 ntBASIC4.27□□□□□ -1.73
TNFSF4P23510 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TNFSF4P23510 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.26□□□□□ -1.73
TNFSF4P23510 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.26□□□□□ -1.73
TNFSF4P23510 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFSF4P23510 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.26□□□□□ -1.73
TNFSF4P23510 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFSF4P23510 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFSF4P23510 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFSF4P23510 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFSF4P23510 AC131971.1-201ENST00000332881 1482 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFSF4P23510 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.26□□□□□ -1.73
TNFSF4P23510 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFSF4P23510 SNORA75-201ENST00000384158 137 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 MIR708-201ENST00000390708 88 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 MIR1271-201ENST00000408537 86 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 SNORA77-201ENST00000408716 125 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 RNU6-516P-201ENST00000411381 104 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 AL663109.1-201ENST00000411498 844 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFSF4P23510 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFSF4P23510 RPS29P9-201ENST00000440360 171 ntBASIC4.26□□□□□ -1.73
TNFSF4P23510 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms