Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH3P22223 LUZP4P1-201ENST00000415420 344 ntBASIC3.86□□□□□ -1.79
CDH3P22223 EI24P1-201ENST00000416584 867 ntBASIC3.86□□□□□ -1.79
CDH3P22223 HMGB1P49-201ENST00000418882 569 ntBASIC3.86□□□□□ -1.79
CDH3P22223 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH3P22223 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH3P22223 AC087650.1-201ENST00000431445 468 ntBASIC3.86□□□□□ -1.79
CDH3P22223 AC011742.1-201ENST00000431448 434 ntBASIC3.86□□□□□ -1.79
CDH3P22223 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.86□□□□□ -1.79
CDH3P22223 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH3P22223 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH3P22223 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.86□□□□□ -1.79
CDH3P22223 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH3P22223 NPM1P49-201ENST00000448027 714 ntBASIC3.86□□□□□ -1.79
CDH3P22223 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH3P22223 RPS11P1-201ENST00000451072 473 ntBASIC3.86□□□□□ -1.79
CDH3P22223 RFC5P1-201ENST00000454419 874 ntBASIC3.86□□□□□ -1.79
CDH3P22223 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH3P22223 RNU7-170P-201ENST00000459303 61 ntBASIC3.86□□□□□ -1.79
CDH3P22223 RPL7L1P8-201ENST00000469911 741 ntBASIC3.86□□□□□ -1.79
CDH3P22223 AP000893.1-201ENST00000474462 794 ntBASIC3.86□□□□□ -1.79
CDH3P22223 RPS4XP15-201ENST00000489210 795 ntBASIC3.86□□□□□ -1.79
CDH3P22223 MTCYBP35-201ENST00000503630 1137 ntBASIC3.86□□□□□ -1.79
CDH3P22223 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH3P22223 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH3P22223 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH3P22223 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH3P22223 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH3P22223 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH3P22223 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH3P22223 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH3P22223 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH3P22223 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.86□□□□□ -1.79
CDH3P22223 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH3P22223 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH3P22223 AC061975.8-201ENST00000587058 721 ntBASIC3.86□□□□□ -1.79
CDH3P22223 AC025588.2-201ENST00000604851 466 ntBASIC3.86□□□□□ -1.79
CDH3P22223 AL109618.2-201ENST00000605527 211 ntBASIC3.86□□□□□ -1.79
CDH3P22223 Z99289.3-201ENST00000605586 594 ntBASIC3.86□□□□□ -1.79
CDH3P22223 AC128687.2-201ENST00000609657 566 ntBASIC3.86□□□□□ -1.79
CDH3P22223 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH3P22223 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.86□□□□□ -1.79
CDH3P22223 AC097520.1-201ENST00000624435 385 ntBASIC3.86□□□□□ -1.79
CDH3P22223 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
CDH3P22223 FAM157B-203ENST00000639350 358 ntBASIC3.86□□□□□ -1.79
CDH3P22223 PRO1804-201ENST00000623780 2050 ntBASIC3.86□□□□□ -1.79
CDH3P22223 AC109315.1-201ENST00000584143 1347 ntBASIC3.86□□□□□ -1.79
CDH3P22223 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH3P22223 MTND5P31-201ENST00000419366 1374 ntBASIC3.86□□□□□ -1.79
CDH3P22223 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH3P22223 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH3P22223 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH3P22223 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.86□□□□□ -1.79
CDH3P22223 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH3P22223 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH3P22223 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH3P22223 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH3P22223 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CDH3P22223 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH3P22223 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH3P22223 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.85□□□□□ -1.79
CDH3P22223 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH3P22223 RNU6-1066P-201ENST00000363573 105 ntBASIC3.85□□□□□ -1.79
CDH3P22223 Y_RNA.192-201ENST00000363977 102 ntBASIC3.85□□□□□ -1.79
CDH3P22223 RNU6-560P-201ENST00000364007 108 ntBASIC3.85□□□□□ -1.79
CDH3P22223 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH3P22223 SUGT1P1-201ENST00000379514 476 ntBASIC3.85□□□□□ -1.79
CDH3P22223 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CDH3P22223 RNA5SP80-201ENST00000410475 111 ntBASIC3.85□□□□□ -1.79
CDH3P22223 RPL30P2-201ENST00000414021 291 ntBASIC3.85□□□□□ -1.79
CDH3P22223 NUP35P2-201ENST00000416748 943 ntBASIC3.85□□□□□ -1.79
CDH3P22223 AC092634.6-201ENST00000418558 192 ntBASIC3.85□□□□□ -1.79
CDH3P22223 MTCO2P21-201ENST00000419780 677 ntBASIC3.85□□□□□ -1.79
CDH3P22223 MRPS36P1-201ENST00000421291 307 ntBASIC3.85□□□□□ -1.79
CDH3P22223 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH3P22223 HIGD1AP4-201ENST00000430194 280 ntBASIC3.85□□□□□ -1.79
CDH3P22223 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH3P22223 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.85□□□□□ -1.79
CDH3P22223 ATP5HP2-201ENST00000433885 485 ntBASIC3.85□□□□□ -1.79
CDH3P22223 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
CDH3P22223 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH3P22223 TBCAP1-201ENST00000436520 327 ntBASIC3.85□□□□□ -1.79
CDH3P22223 COX7BP2-201ENST00000437976 242 ntBASIC3.85□□□□□ -1.79
CDH3P22223 FGF7P5-201ENST00000441829 291 ntBASIC3.85□□□□□ -1.79
CDH3P22223 RPL23AP33-201ENST00000442301 452 ntBASIC3.85□□□□□ -1.79
CDH3P22223 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH3P22223 NDUFA5P7-201ENST00000452914 242 ntBASIC3.85□□□□□ -1.79
CDH3P22223 PNPLA4P1-201ENST00000458328 305 ntBASIC3.85□□□□□ -1.79
CDH3P22223 snoU13.7-201ENST00000459220 104 ntBASIC3.85□□□□□ -1.79
CDH3P22223 AC108734.3-201ENST00000481241 1165 ntBASIC3.85□□□□□ -1.79
CDH3P22223 RPL31P13-201ENST00000484151 370 ntBASIC3.85□□□□□ -1.79
CDH3P22223 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH3P22223 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH3P22223 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CDH3P22223 TMEM248P1-201ENST00000510579 951 ntBASIC3.85□□□□□ -1.79
CDH3P22223 NPM1P41-201ENST00000512920 831 ntBASIC3.85□□□□□ -1.79
CDH3P22223 RNA5SP179-201ENST00000517284 121 ntBASIC3.85□□□□□ -1.79
CDH3P22223 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH3P22223 AP000790.1-201ENST00000528891 737 ntBASIC3.85□□□□□ -1.79
CDH3P22223 AC023050.2-201ENST00000544968 387 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms