Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 CBX1P4-201ENST00000439415 457 ntBASIC2.77□□□□□ -1.97
COL5A1P20908 IFNA11P-201ENST00000446352 526 ntBASIC2.77□□□□□ -1.97
COL5A1P20908 RPS27P29-201ENST00000463110 252 ntBASIC2.77□□□□□ -1.97
COL5A1P20908 AP002371.1-201ENST00000463604 433 ntBASIC2.77□□□□□ -1.97
COL5A1P20908 HSPE1P6-201ENST00000479457 291 ntBASIC2.77□□□□□ -1.97
COL5A1P20908 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.77□□□□□ -1.97
COL5A1P20908 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
COL5A1P20908 AC008549.1-201ENST00000512900 643 ntBASIC2.77□□□□□ -1.97
COL5A1P20908 RNA5SP380-201ENST00000517190 98 ntBASIC2.77□□□□□ -1.97
COL5A1P20908 TMF1P1-201ENST00000576058 373 ntBASIC2.77□□□□□ -1.97
COL5A1P20908 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.77□□□□□ -1.97
COL5A1P20908 AL158827.2-201ENST00000602494 330 ntBASIC2.77□□□□□ -1.97
COL5A1P20908 AL691447.3-201ENST00000635020 330 ntBASIC2.77□□□□□ -1.97
COL5A1P20908 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.76□□□□□ -1.97
COL5A1P20908 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
COL5A1P20908 AC134882.1-201ENST00000603738 1676 ntBASIC2.76□□□□□ -1.97
COL5A1P20908 RNA5SP107-201ENST00000411358 122 ntBASIC2.76□□□□□ -1.97
COL5A1P20908 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC2.76□□□□□ -1.97
COL5A1P20908 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.76□□□□□ -1.97
COL5A1P20908 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.76□□□□□ -1.97
COL5A1P20908 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.76□□□□□ -1.97
COL5A1P20908 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC2.76□□□□□ -1.97
COL5A1P20908 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.76□□□□□ -1.97
COL5A1P20908 RAD1P2-201ENST00000446414 663 ntBASIC2.76□□□□□ -1.97
COL5A1P20908 AL162389.1-201ENST00000449233 177 ntBASIC2.76□□□□□ -1.97
COL5A1P20908 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.76□□□□□ -1.97
COL5A1P20908 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.76□□□□□ -1.97
COL5A1P20908 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
COL5A1P20908 AC008837.1-201ENST00000511513 412 ntBASIC2.76□□□□□ -1.97
COL5A1P20908 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.76□□□□□ -1.97
COL5A1P20908 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.76□□□□□ -1.97
COL5A1P20908 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.76□□□□□ -1.97
COL5A1P20908 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.76□□□□□ -1.97
COL5A1P20908 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.76□□□□□ -1.97
COL5A1P20908 AC234775.3-201ENST00000564612 656 ntBASIC2.76□□□□□ -1.97
COL5A1P20908 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.76□□□□□ -1.97
COL5A1P20908 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.76□□□□□ -1.97
COL5A1P20908 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.76□□□□□ -1.97
COL5A1P20908 AC025754.2-201ENST00000606491 432 ntBASIC2.76□□□□□ -1.97
COL5A1P20908 AL591516.1-201ENST00000611326 274 ntBASIC2.76□□□□□ -1.97
COL5A1P20908 AP002967.1-201ENST00000624203 539 ntBASIC2.76□□□□□ -1.97
COL5A1P20908 AC103798.2-201ENST00000624292 632 ntBASIC2.76□□□□□ -1.97
COL5A1P20908 AC132825.8-201ENST00000640783 297 ntBASIC2.76□□□□□ -1.97
COL5A1P20908 AL163152.1-201ENST00000642001 374 ntBASIC2.76□□□□□ -1.97
COL5A1P20908 AL133412.1-201ENST00000380194 2992 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL5A1P20908 RNU4-23P-201ENST00000362839 140 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 AL139039.1-201ENST00000401900 692 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 MTCO3P31-201ENST00000405526 789 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.75□□□□□ -1.97
COL5A1P20908 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.75□□□□□ -1.97
COL5A1P20908 AL513328.1-201ENST00000446460 224 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 MTND2P3-201ENST00000452458 470 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 AP001960.1-201ENST00000506494 658 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.75□□□□□ -1.97
COL5A1P20908 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.75□□□□□ -1.97
COL5A1P20908 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.75□□□□□ -1.97
COL5A1P20908 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.75□□□□□ -1.97
COL5A1P20908 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.75□□□□□ -1.97
COL5A1P20908 AC007424.1-203ENST00000554613 687 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.75□□□□□ -1.97
COL5A1P20908 VN1R79P-201ENST00000593540 513 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 AL713998.2-201ENST00000604538 1198 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 AC138473.1-201ENST00000605717 526 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.75□□□□□ -1.97
COL5A1P20908 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
COL5A1P20908 AC245100.2-201ENST00000454544 1679 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.75□□□□□ -1.97
COL5A1P20908 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.75□□□□□ -1.97
COL5A1P20908 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
COL5A1P20908 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.75□□□□□ -1.97
COL5A1P20908 RNU1-112P-201ENST00000364401 164 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.75□□□□□ -1.97
COL5A1P20908 PTP4A1P1-201ENST00000420539 515 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.75□□□□□ -1.97
COL5A1P20908 WASF1P1-201ENST00000447560 1131 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 snoU13.23-201ENST00000458863 104 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 AC089999.1-201ENST00000460336 374 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 HMGN1P8-201ENST00000463578 288 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.75□□□□□ -1.97
COL5A1P20908 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.75□□□□□ -1.97
COL5A1P20908 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.75□□□□□ -1.97
COL5A1P20908 AC021733.2-201ENST00000518830 497 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.75□□□□□ -1.97
COL5A1P20908 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL5A1P20908 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.75□□□□□ -1.97
COL5A1P20908 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.75□□□□□ -1.97
COL5A1P20908 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.75□□□□□ -1.97
COL5A1P20908 AC096586.2-201ENST00000610260 441 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.75□□□□□ -1.97
COL5A1P20908 AC007318.2-201ENST00000620999 243 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 AL391262.2-201ENST00000622466 494 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 MIR6715B-201ENST00000637172 77 ntBASIC2.75□□□□□ -1.97
COL5A1P20908 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
COL5A1P20908 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
COL5A1P20908 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.74□□□□□ -1.97
COL5A1P20908 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL5A1P20908 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.74□□□□□ -1.97
COL5A1P20908 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms