Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 HIGD1AP10-201ENST00000527837 282 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AC008127.2-201ENST00000549925 1075 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AC107016.1-201ENST00000550463 337 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AL163642.2-201ENST00000604722 1019 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 HMGB1P50-201ENST00000605814 607 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AC124016.2-201ENST00000610058 665 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AC006249.1-201ENST00000621223 471 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AL359715.5-201ENST00000623431 443 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AC087821.2-201ENST00000637086 450 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AL031985.3-201ENST00000565390 2449 ntBASIC3.78□□□□□ -1.81
HLA-DPA1P20036 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 PRO1804-201ENST00000623780 2050 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 MIR554-201ENST00000384874 96 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 U3.29-201ENST00000391296 212 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC016769.3-201ENST00000396562 315 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 RNU2-28P-201ENST00000410457 189 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AMD1P2-201ENST00000412936 992 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 RPL21P109-201ENST00000422213 475 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 MTCO3P20-201ENST00000454926 688 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC112198.4-201ENST00000515450 351 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 RN7SKP13-201ENST00000515933 244 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 RNU1-61P-201ENST00000516107 151 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 IGKV2-23-201ENST00000518729 323 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 MTCO3P15-201ENST00000526563 574 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AL139174.1-201ENST00000531489 886 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC092851.1-201ENST00000535964 478 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC020914.4-201ENST00000597690 277 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AL592148.2-201ENST00000612210 372 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AL590240.3-201ENST00000621416 943 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 PLCE1P1-201ENST00000622094 305 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC080188.3-201ENST00000624842 748 ntBASIC3.77□□□□□ -1.81
HLA-DPA1P20036 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPA1P20036 AC138915.3-201ENST00000562908 1389 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AL627171.1-201ENST00000618845 1308 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 RNU1-18P-201ENST00000363062 164 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 MIR134-201ENST00000385258 73 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 RNU6-1300P-201ENST00000391046 108 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 RPL32P23-201ENST00000397237 405 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 RN7SKP159-201ENST00000410657 292 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AL024507.1-201ENST00000412741 274 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 RPL36AP36-201ENST00000418616 301 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 TCEA1P2-201ENST00000420496 906 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 NEK4P1-201ENST00000433383 879 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 ARL4AP4-201ENST00000434170 518 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 SETP5-201ENST00000437270 562 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 CDC27P1-201ENST00000445384 715 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AC099563.1-201ENST00000456086 418 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AL133162.1-201ENST00000463228 453 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 RNU1-45P-201ENST00000517191 141 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 NARSP2-201ENST00000518524 679 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AL121766.1-201ENST00000547436 487 ntBASIC3.76□□□□□ -1.81
HLA-DPA1P20036 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DPA1P20036 EEF1B2P4-201ENST00000551398 348 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms