Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.12□□□□□ -1.75
PCNAP12004 AL390023.1-201ENST00000428836 262 ntBASIC4.12□□□□□ -1.75
PCNAP12004 BMS1P19-201ENST00000433925 393 ntBASIC4.12□□□□□ -1.75
PCNAP12004 ISCA1P2-201ENST00000438679 421 ntBASIC4.12□□□□□ -1.75
PCNAP12004 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.12□□□□□ -1.75
PCNAP12004 AC118469.1-201ENST00000442943 488 ntBASIC4.12□□□□□ -1.75
PCNAP12004 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.12□□□□□ -1.75
PCNAP12004 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.12□□□□□ -1.75
PCNAP12004 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.12□□□□□ -1.75
PCNAP12004 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.12□□□□□ -1.75
PCNAP12004 HMGN2P7-201ENST00000456186 273 ntBASIC4.12□□□□□ -1.75
PCNAP12004 TRBV26-201ENST00000456572 344 ntBASIC4.12□□□□□ -1.75
PCNAP12004 RPL23AP24-201ENST00000458203 385 ntBASIC4.12□□□□□ -1.75
PCNAP12004 RPS26P15-201ENST00000488067 348 ntBASIC4.12□□□□□ -1.75
PCNAP12004 RN7SL810P-201ENST00000493031 276 ntBASIC4.12□□□□□ -1.75
PCNAP12004 AP001086.1-201ENST00000494882 321 ntBASIC4.12□□□□□ -1.75
PCNAP12004 HMGB1P21-201ENST00000502313 581 ntBASIC4.12□□□□□ -1.75
PCNAP12004 AC108941.1-201ENST00000502853 530 ntBASIC4.12□□□□□ -1.75
PCNAP12004 AC108145.1-201ENST00000503770 153 ntBASIC4.12□□□□□ -1.75
PCNAP12004 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.12□□□□□ -1.75
PCNAP12004 USP9YP5-201ENST00000511770 630 ntBASIC4.12□□□□□ -1.75
PCNAP12004 AC006499.2-201ENST00000513470 337 ntBASIC4.12□□□□□ -1.75
PCNAP12004 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.12□□□□□ -1.75
PCNAP12004 RNU6-678P-201ENST00000516832 109 ntBASIC4.12□□□□□ -1.75
PCNAP12004 AC006064.5-201ENST00000541782 248 ntBASIC4.12□□□□□ -1.75
PCNAP12004 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.12□□□□□ -1.75
PCNAP12004 AC092470.1-201ENST00000546187 132 ntBASIC4.12□□□□□ -1.75
PCNAP12004 AL109766.1-201ENST00000555080 552 ntBASIC4.12□□□□□ -1.75
PCNAP12004 AC004223.2-201ENST00000590309 544 ntBASIC4.12□□□□□ -1.75
PCNAP12004 AC234771.5-201ENST00000600161 514 ntBASIC4.12□□□□□ -1.75
PCNAP12004 AC025588.3-201ENST00000604182 274 ntBASIC4.12□□□□□ -1.75
PCNAP12004 AC019193.2-201ENST00000610012 634 ntBASIC4.12□□□□□ -1.75
PCNAP12004 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.12□□□□□ -1.75
PCNAP12004 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.12□□□□□ -1.75
PCNAP12004 AC011477.1-204ENST00000623416 1325 ntBASIC4.12□□□□□ -1.75
PCNAP12004 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PCNAP12004 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCNAP12004 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCNAP12004 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.12□□□□□ -1.75
PCNAP12004 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCNAP12004 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.11□□□□□ -1.75
PCNAP12004 AC027287.1-201ENST00000553115 1453 ntBASIC4.11□□□□□ -1.75
PCNAP12004 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCNAP12004 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCNAP12004 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCNAP12004 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCNAP12004 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCNAP12004 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCNAP12004 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCNAP12004 RPL21P132-201ENST00000331267 462 ntBASIC4.11□□□□□ -1.75
PCNAP12004 Y_RNA.18-201ENST00000362461 102 ntBASIC4.11□□□□□ -1.75
PCNAP12004 RNU6-433P-201ENST00000363216 104 ntBASIC4.11□□□□□ -1.75
PCNAP12004 RNA5SP167-201ENST00000365461 116 ntBASIC4.11□□□□□ -1.75
PCNAP12004 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCNAP12004 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCNAP12004 RNA5SP36-201ENST00000410197 133 ntBASIC4.11□□□□□ -1.75
PCNAP12004 RNU6-920P-201ENST00000410926 92 ntBASIC4.11□□□□□ -1.75
PCNAP12004 RPL23AP26-201ENST00000412728 464 ntBASIC4.11□□□□□ -1.75
PCNAP12004 RPL26P29-201ENST00000415623 438 ntBASIC4.11□□□□□ -1.75
PCNAP12004 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.11□□□□□ -1.75
PCNAP12004 AL732292.1-201ENST00000426692 226 ntBASIC4.11□□□□□ -1.75
PCNAP12004 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.11□□□□□ -1.75
PCNAP12004 OR51AB1P-201ENST00000429046 620 ntBASIC4.11□□□□□ -1.75
PCNAP12004 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.11□□□□□ -1.75
PCNAP12004 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.11□□□□□ -1.75
PCNAP12004 ELOCP18-201ENST00000434209 337 ntBASIC4.11□□□□□ -1.75
PCNAP12004 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.11□□□□□ -1.75
PCNAP12004 RPS3AP54-201ENST00000435535 734 ntBASIC4.11□□□□□ -1.75
PCNAP12004 USP9YP7-201ENST00000436723 430 ntBASIC4.11□□□□□ -1.75
PCNAP12004 GSTA7P-201ENST00000438425 448 ntBASIC4.11□□□□□ -1.75
PCNAP12004 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.11□□□□□ -1.75
PCNAP12004 USP9YP32-201ENST00000452432 430 ntBASIC4.11□□□□□ -1.75
PCNAP12004 ANP32BP2-201ENST00000454525 545 ntBASIC4.11□□□□□ -1.75
PCNAP12004 MTCO3P11-201ENST00000455103 774 ntBASIC4.11□□□□□ -1.75
PCNAP12004 AC097493.1-201ENST00000463958 372 ntBASIC4.11□□□□□ -1.75
PCNAP12004 RPL30P6-201ENST00000475925 342 ntBASIC4.11□□□□□ -1.75
PCNAP12004 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.11□□□□□ -1.75
PCNAP12004 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.11□□□□□ -1.75
PCNAP12004 MTCO3P28-201ENST00000513351 515 ntBASIC4.11□□□□□ -1.75
PCNAP12004 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.11□□□□□ -1.75
PCNAP12004 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.11□□□□□ -1.75
PCNAP12004 AC117532.1-201ENST00000514638 323 ntBASIC4.11□□□□□ -1.75
PCNAP12004 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.11□□□□□ -1.75
PCNAP12004 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.11□□□□□ -1.75
PCNAP12004 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
PCNAP12004 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.11□□□□□ -1.75
PCNAP12004 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.11□□□□□ -1.75
PCNAP12004 PSMB7P1-201ENST00000556349 514 ntBASIC4.11□□□□□ -1.75
PCNAP12004 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.11□□□□□ -1.75
PCNAP12004 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.11□□□□□ -1.75
PCNAP12004 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.11□□□□□ -1.75
PCNAP12004 MIR4330-201ENST00000579077 105 ntBASIC4.11□□□□□ -1.75
PCNAP12004 MIR4637-201ENST00000582405 84 ntBASIC4.11□□□□□ -1.75
PCNAP12004 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.11□□□□□ -1.75
PCNAP12004 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PCNAP12004 AC020914.4-201ENST00000597690 277 ntBASIC4.11□□□□□ -1.75
PCNAP12004 WISP1-OT1-201ENST00000602893 642 ntBASIC4.11□□□□□ -1.75
PCNAP12004 BNIP3P11-201ENST00000603878 563 ntBASIC4.11□□□□□ -1.75
PCNAP12004 AC110741.2-201ENST00000605278 268 ntBASIC4.11□□□□□ -1.75
PCNAP12004 AL356596.1-201ENST00000624230 379 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms