Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 MIR6733-201ENST00000635723 61 ntBASIC2.56□□□□□ -2
SNRNP200O75643 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SNRNP200O75643 MTCO1P8-201ENST00000416914 1523 ntBASIC2.55□□□□□ -2
SNRNP200O75643 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.55□□□□□ -2
SNRNP200O75643 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SNRNP200O75643 OR13C3-201ENST00000374781 1108 ntBASIC2.55□□□□□ -2
SNRNP200O75643 HSPE1P26-201ENST00000405341 275 ntBASIC2.55□□□□□ -2
SNRNP200O75643 AL451074.5-201ENST00000415894 435 ntBASIC2.55□□□□□ -2
SNRNP200O75643 RPLP0P7-201ENST00000416050 667 ntBASIC2.55□□□□□ -2
SNRNP200O75643 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.55□□□□□ -2
SNRNP200O75643 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.55□□□□□ -2
SNRNP200O75643 FTH1P1-201ENST00000437933 532 ntBASIC2.55□□□□□ -2
SNRNP200O75643 MTCYBP31-201ENST00000438855 1122 ntBASIC2.55□□□□□ -2
SNRNP200O75643 GAPDHP27-201ENST00000447427 1020 ntBASIC2.55□□□□□ -2
SNRNP200O75643 RPS3P1-201ENST00000456781 192 ntBASIC2.55□□□□□ -2
SNRNP200O75643 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.55□□□□□ -2
SNRNP200O75643 KCTD9P5-201ENST00000504141 1170 ntBASIC2.55□□□□□ -2
SNRNP200O75643 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SNRNP200O75643 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.55□□□□□ -2
SNRNP200O75643 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
SNRNP200O75643 AC025260.1-201ENST00000548858 430 ntBASIC2.55□□□□□ -2
SNRNP200O75643 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.55□□□□□ -2
SNRNP200O75643 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.55□□□□□ -2
SNRNP200O75643 AL096803.3-201ENST00000609032 532 ntBASIC2.55□□□□□ -2
SNRNP200O75643 AP003485.2-201ENST00000623636 610 ntBASIC2.55□□□□□ -2
SNRNP200O75643 CR392039.4-201ENST00000624968 501 ntBASIC2.55□□□□□ -2
SNRNP200O75643 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.55□□□□□ -2
SNRNP200O75643 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.55□□□□□ -2
SNRNP200O75643 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.55□□□□□ -2
SNRNP200O75643 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
SNRNP200O75643 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.54□□□□□ -2
SNRNP200O75643 Y_RNA.500-201ENST00000384466 111 ntBASIC2.54□□□□□ -2
SNRNP200O75643 RNU2-6P-201ENST00000411404 190 ntBASIC2.54□□□□□ -2
SNRNP200O75643 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.54□□□□□ -2
SNRNP200O75643 BMS1P22-201ENST00000414726 313 ntBASIC2.54□□□□□ -2
SNRNP200O75643 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.54□□□□□ -2
SNRNP200O75643 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC2.54□□□□□ -2
SNRNP200O75643 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.54□□□□□ -2
SNRNP200O75643 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.54□□□□□ -2
SNRNP200O75643 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.54□□□□□ -2
SNRNP200O75643 ST13P20-201ENST00000447996 1065 ntBASIC2.54□□□□□ -2
SNRNP200O75643 CFTRP1-201ENST00000456646 183 ntBASIC2.54□□□□□ -2
SNRNP200O75643 AC103975.1-201ENST00000482506 483 ntBASIC2.54□□□□□ -2
SNRNP200O75643 RN7SL297P-201ENST00000483161 293 ntBASIC2.54□□□□□ -2
SNRNP200O75643 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.54□□□□□ -2
SNRNP200O75643 MIR3162-201ENST00000581818 82 ntBASIC2.54□□□□□ -2
SNRNP200O75643 MIR4635-201ENST00000583759 79 ntBASIC2.54□□□□□ -2
SNRNP200O75643 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.54□□□□□ -2
SNRNP200O75643 VN1R84P-201ENST00000593697 235 ntBASIC2.54□□□□□ -2
SNRNP200O75643 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.54□□□□□ -2
SNRNP200O75643 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.54□□□□□ -2
SNRNP200O75643 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SNRNP200O75643 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SNRNP200O75643 AC008264.2-201ENST00000610193 3731 ntBASIC2.54□□□□□ -2
SNRNP200O75643 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.54□□□□□ -2
SNRNP200O75643 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.54□□□□□ -2
SNRNP200O75643 AL136360.1-201ENST00000503377 1900 ntBASIC2.54□□□□□ -2
SNRNP200O75643 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
SNRNP200O75643 RNA5SP68-201ENST00000363885 119 ntBASIC2.54□□□□□ -2
SNRNP200O75643 SNORA67.4-201ENST00000384688 142 ntBASIC2.54□□□□□ -2
SNRNP200O75643 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.54□□□□□ -2
SNRNP200O75643 RPL29P29-201ENST00000448725 423 ntBASIC2.54□□□□□ -2
SNRNP200O75643 MTCO1P30-201ENST00000515244 580 ntBASIC2.54□□□□□ -2
SNRNP200O75643 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.54□□□□□ -2
SNRNP200O75643 AC093331.1-201ENST00000521474 169 ntBASIC2.54□□□□□ -2
SNRNP200O75643 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SNRNP200O75643 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.54□□□□□ -2
SNRNP200O75643 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.54□□□□□ -2
SNRNP200O75643 MIR4458-201ENST00000578872 75 ntBASIC2.54□□□□□ -2
SNRNP200O75643 MIR3605-201ENST00000583214 100 ntBASIC2.54□□□□□ -2
SNRNP200O75643 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.54□□□□□ -2
SNRNP200O75643 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.54□□□□□ -2
SNRNP200O75643 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SNRNP200O75643 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.54□□□□□ -2
SNRNP200O75643 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.54□□□□□ -2
SNRNP200O75643 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SNRNP200O75643 RPL5P18-201ENST00000406671 891 ntBASIC2.53□□□□□ -2
SNRNP200O75643 AC007390.1-201ENST00000415722 356 ntBASIC2.53□□□□□ -2
SNRNP200O75643 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.53□□□□□ -2
SNRNP200O75643 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.53□□□□□ -2
SNRNP200O75643 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.53□□□□□ -2
SNRNP200O75643 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.53□□□□□ -2
SNRNP200O75643 AP000873.1-201ENST00000463987 400 ntBASIC2.53□□□□□ -2
SNRNP200O75643 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.53□□□□□ -2
SNRNP200O75643 RNA5SP356-201ENST00000515972 94 ntBASIC2.53□□□□□ -2
SNRNP200O75643 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.53□□□□□ -2
SNRNP200O75643 SERPINE4P-201ENST00000554978 281 ntBASIC2.53□□□□□ -2
SNRNP200O75643 AC027807.1-201ENST00000559921 996 ntBASIC2.53□□□□□ -2
SNRNP200O75643 AC048347.1-201ENST00000624621 427 ntBASIC2.53□□□□□ -2
SNRNP200O75643 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SNRNP200O75643 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.53□□□□□ -2
SNRNP200O75643 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
SNRNP200O75643 AC087565.3-202ENST00000642085 1603 ntBASIC2.53□□□□□ -2
SNRNP200O75643 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SNRNP200O75643 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
SNRNP200O75643 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.53□□□□□ -2.01
SNRNP200O75643 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.53□□□□□ -2.01
SNRNP200O75643 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.53□□□□□ -2.01
SNRNP200O75643 AC098799.1-201ENST00000504752 800 ntBASIC2.53□□□□□ -2.01
SNRNP200O75643 RNA5SP320-201ENST00000516263 124 ntBASIC2.53□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms