Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4BO75351 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS4BO75351 MTND3P21-201ENST00000433774 331 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS4BO75351 RHOT1P3-201ENST00000436571 331 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 RPL23AP74-201ENST00000437246 471 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 AC244505.5-201ENST00000443639 207 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 SLC25A18P1-201ENST00000449385 454 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 USP9YP12-201ENST00000450481 570 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS4BO75351 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS4BO75351 AC005008.1-201ENST00000456151 612 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 APOOP2-201ENST00000461561 539 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS4BO75351 AC011005.3-201ENST00000491624 395 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 RPL7P24-201ENST00000493052 752 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 AC108941.1-201ENST00000502853 530 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS4BO75351 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS4BO75351 AC108064.1-201ENST00000513791 460 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS4BO75351 AC134698.5-201ENST00000519444 336 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS4BO75351 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.61□□□□□ -1.67
VPS4BO75351 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS4BO75351 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS4BO75351 AGGF1P8-201ENST00000562979 1000 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS4BO75351 BNIP3P33-201ENST00000598912 569 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 AC020910.2-201ENST00000603635 610 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 AC126118.1-201ENST00000607744 628 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 AC007684.1-201ENST00000609671 477 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 AL022401.1-201ENST00000619498 108 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 AL445264.1-201ENST00000621719 171 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4BO75351 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS4BO75351 MAPK10-349ENST00000641767 3661 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
VPS4BO75351 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4BO75351 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4BO75351 LINC01109-201ENST00000603837 3081 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
VPS4BO75351 AC130650.2-201ENST00000618736 2403 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4BO75351 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
VPS4BO75351 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4BO75351 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4BO75351 SNORD115.1-201ENST00000391109 76 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4BO75351 AC016769.3-201ENST00000396562 315 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 MIR1193-201ENST00000408109 78 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 MIR320C1-201ENST00000408566 88 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS4BO75351 AC114755.2-201ENST00000413520 361 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 USP9YP13-201ENST00000417797 480 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 OR8F1P-201ENST00000425243 930 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 RSL24D1P6-201ENST00000426934 401 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 BX890604.2-201ENST00000427883 474 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS4BO75351 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS4BO75351 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS4BO75351 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS4BO75351 MTND1P1-201ENST00000445453 368 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 AC098824.1-201ENST00000453565 980 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS4BO75351 KLF3P2-201ENST00000465138 268 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 AC090142.1-201ENST00000465776 462 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 AC004924.1-201ENST00000480160 781 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 AC105252.1-201ENST00000503089 286 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 AK3P4-201ENST00000504283 583 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS4BO75351 AC091133.4-201ENST00000511142 308 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS4BO75351 HMGB1P19-201ENST00000517578 577 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS4BO75351 MTCYBP41-201ENST00000528913 1123 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 OR5AP1P-201ENST00000529730 940 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS4BO75351 CCNG2P1-201ENST00000549521 1000 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 EEF1B2P4-201ENST00000551398 348 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS4BO75351 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS4BO75351 AC093249.4-201ENST00000564755 259 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 TPRKBP2-201ENST00000565969 475 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 MIR4277-201ENST00000578298 84 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 MAGOH2P-202ENST00000584384 429 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS4BO75351 BNIP3P8-201ENST00000597863 560 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 AL022154.1-201ENST00000604698 785 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS4BO75351 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS4BO75351 U4.5-201ENST00000617137 123 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 MIR6830-201ENST00000636015 70 ntBASIC4.6□□□□□ -1.67
VPS4BO75351 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4BO75351 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4BO75351 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4BO75351 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4BO75351 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms