Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 BX649567.1-201ENST00000642071 1134 ntBASIC3.36□□□□□ -1.87
HCN1O60741 AL732372.2-225ENST00000642124 456 ntBASIC3.36□□□□□ -1.87
HCN1O60741 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HCN1O60741 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HCN1O60741 AL136520.1-201ENST00000600311 1322 ntBASIC3.36□□□□□ -1.87
HCN1O60741 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.36□□□□□ -1.87
HCN1O60741 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HCN1O60741 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
HCN1O60741 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HCN1O60741 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
HCN1O60741 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
HCN1O60741 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
HCN1O60741 RNU6-335P-201ENST00000364563 113 ntBASIC3.35□□□□□ -1.87
HCN1O60741 RNA5SP51-201ENST00000364750 119 ntBASIC3.35□□□□□ -1.87
HCN1O60741 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
HCN1O60741 AL138880.1-201ENST00000405824 642 ntBASIC3.35□□□□□ -1.87
HCN1O60741 RNU2-71P-201ENST00000411395 189 ntBASIC3.35□□□□□ -1.87
HCN1O60741 AC069282.1-201ENST00000411911 526 ntBASIC3.35□□□□□ -1.87
HCN1O60741 RPS29P4-201ENST00000414733 161 ntBASIC3.35□□□□□ -1.87
HCN1O60741 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.35□□□□□ -1.87
HCN1O60741 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.35□□□□□ -1.87
HCN1O60741 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.35□□□□□ -1.87
HCN1O60741 AC013262.1-201ENST00000426710 252 ntBASIC3.35□□□□□ -1.87
HCN1O60741 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.35□□□□□ -1.87
HCN1O60741 YME1L1P1-201ENST00000429435 297 ntBASIC3.35□□□□□ -1.87
HCN1O60741 UBE2V1P1-201ENST00000430836 445 ntBASIC3.35□□□□□ -1.87
HCN1O60741 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HCN1O60741 AL590103.1-201ENST00000434488 307 ntBASIC3.35□□□□□ -1.87
HCN1O60741 NDUFB1P1-201ENST00000435191 180 ntBASIC3.35□□□□□ -1.87
HCN1O60741 AC234064.1-201ENST00000436312 247 ntBASIC3.35□□□□□ -1.87
HCN1O60741 HSPD1P21-201ENST00000436541 245 ntBASIC3.35□□□□□ -1.87
HCN1O60741 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.35□□□□□ -1.87
HCN1O60741 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.35□□□□□ -1.87
HCN1O60741 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.35□□□□□ -1.87
HCN1O60741 HMGN2P16-201ENST00000456802 261 ntBASIC3.35□□□□□ -1.87
HCN1O60741 snoU13.22-201ENST00000459428 104 ntBASIC3.35□□□□□ -1.87
HCN1O60741 AC092754.2-201ENST00000463506 460 ntBASIC3.35□□□□□ -1.87
HCN1O60741 RPL5P24-201ENST00000463742 885 ntBASIC3.35□□□□□ -1.87
HCN1O60741 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.35□□□□□ -1.87
HCN1O60741 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.35□□□□□ -1.87
HCN1O60741 RPS3AP50-201ENST00000487064 803 ntBASIC3.35□□□□□ -1.87
HCN1O60741 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.35□□□□□ -1.87
HCN1O60741 AC093801.2-201ENST00000503966 1050 ntBASIC3.35□□□□□ -1.87
HCN1O60741 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.35□□□□□ -1.87
HCN1O60741 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.35□□□□□ -1.87
HCN1O60741 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.35□□□□□ -1.87
HCN1O60741 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.35□□□□□ -1.87
HCN1O60741 CYB5AP5-201ENST00000549779 389 ntBASIC3.35□□□□□ -1.87
HCN1O60741 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.35□□□□□ -1.87
HCN1O60741 TRAV15-201ENST00000556680 249 ntBASIC3.35□□□□□ -1.87
HCN1O60741 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.35□□□□□ -1.87
HCN1O60741 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.35□□□□□ -1.87
HCN1O60741 MIR4504-201ENST00000577413 92 ntBASIC3.35□□□□□ -1.87
HCN1O60741 AC090666.1-201ENST00000578241 445 ntBASIC3.35□□□□□ -1.87
HCN1O60741 MIR3908-201ENST00000579798 126 ntBASIC3.35□□□□□ -1.87
HCN1O60741 AC020914.6-201ENST00000594327 272 ntBASIC3.35□□□□□ -1.87
HCN1O60741 U3.45-201ENST00000607547 219 ntBASIC3.35□□□□□ -1.87
HCN1O60741 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.35□□□□□ -1.87
HCN1O60741 AP000553.6-201ENST00000641242 118 ntBASIC3.35□□□□□ -1.87
HCN1O60741 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.35□□□□□ -1.87
HCN1O60741 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.35□□□□□ -1.87
HCN1O60741 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HCN1O60741 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HCN1O60741 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
HCN1O60741 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.34□□□□□ -1.87
HCN1O60741 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.34□□□□□ -1.87
HCN1O60741 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HCN1O60741 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HCN1O60741 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HCN1O60741 RNU6-1243P-201ENST00000364028 107 ntBASIC3.34□□□□□ -1.87
HCN1O60741 MCTS2P-201ENST00000394552 546 ntBASIC3.34□□□□□ -1.87
HCN1O60741 AL035405.1-201ENST00000400795 710 ntBASIC3.34□□□□□ -1.87
HCN1O60741 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.34□□□□□ -1.87
HCN1O60741 RPL23AP47-201ENST00000408017 460 ntBASIC3.34□□□□□ -1.87
HCN1O60741 RNU6-55P-201ENST00000411092 107 ntBASIC3.34□□□□□ -1.87
HCN1O60741 RNU6-954P-201ENST00000411355 107 ntBASIC3.34□□□□□ -1.87
HCN1O60741 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.34□□□□□ -1.87
HCN1O60741 OR51A3P-201ENST00000413596 924 ntBASIC3.34□□□□□ -1.87
HCN1O60741 AL049610.1-201ENST00000423374 372 ntBASIC3.34□□□□□ -1.87
HCN1O60741 AC005517.2-201ENST00000424673 553 ntBASIC3.34□□□□□ -1.87
HCN1O60741 MRPS18BP2-201ENST00000434310 759 ntBASIC3.34□□□□□ -1.87
HCN1O60741 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.34□□□□□ -1.87
HCN1O60741 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.34□□□□□ -1.87
HCN1O60741 SEPT14P24-201ENST00000447236 180 ntBASIC3.34□□□□□ -1.87
HCN1O60741 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.34□□□□□ -1.87
HCN1O60741 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.34□□□□□ -1.87
HCN1O60741 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.34□□□□□ -1.87
HCN1O60741 AC087312.1-201ENST00000471411 480 ntBASIC3.34□□□□□ -1.87
HCN1O60741 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.34□□□□□ -1.87
HCN1O60741 HMGB1P38-201ENST00000490557 577 ntBASIC3.34□□□□□ -1.87
HCN1O60741 AC005726.1-201ENST00000494679 427 ntBASIC3.34□□□□□ -1.87
HCN1O60741 AC110768.1-201ENST00000509222 400 ntBASIC3.34□□□□□ -1.87
HCN1O60741 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.34□□□□□ -1.87
HCN1O60741 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.34□□□□□ -1.87
HCN1O60741 AC104619.4-201ENST00000510773 249 ntBASIC3.34□□□□□ -1.87
HCN1O60741 AC112206.4-201ENST00000515142 405 ntBASIC3.34□□□□□ -1.87
HCN1O60741 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.34□□□□□ -1.87
HCN1O60741 RNU6-488P-201ENST00000515918 99 ntBASIC3.34□□□□□ -1.87
HCN1O60741 RANP9-201ENST00000519957 271 ntBASIC3.34□□□□□ -1.87
HCN1O60741 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms