Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 KCTD9P2-201ENST00000512203 1013 ntBASIC3.87□□□□□ -1.79
ZIC3O60481 RNA5SP519-201ENST00000516480 119 ntBASIC3.87□□□□□ -1.79
ZIC3O60481 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.87□□□□□ -1.79
ZIC3O60481 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.87□□□□□ -1.79
ZIC3O60481 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.87□□□□□ -1.79
ZIC3O60481 AC006064.5-201ENST00000541782 248 ntBASIC3.87□□□□□ -1.79
ZIC3O60481 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.87□□□□□ -1.79
ZIC3O60481 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.87□□□□□ -1.79
ZIC3O60481 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.87□□□□□ -1.79
ZIC3O60481 PARP1P2-201ENST00000556806 195 ntBASIC3.87□□□□□ -1.79
ZIC3O60481 AC136624.4-201ENST00000573044 370 ntBASIC3.87□□□□□ -1.79
ZIC3O60481 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.87□□□□□ -1.79
ZIC3O60481 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ZIC3O60481 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.87□□□□□ -1.79
ZIC3O60481 AL161729.3-201ENST00000603533 673 ntBASIC3.87□□□□□ -1.79
ZIC3O60481 AC239868.4-201ENST00000608318 671 ntBASIC3.87□□□□□ -1.79
ZIC3O60481 AL159169.3-201ENST00000608871 561 ntBASIC3.87□□□□□ -1.79
ZIC3O60481 FAM27D1-201ENST00000612308 341 ntBASIC3.87□□□□□ -1.79
ZIC3O60481 AL138721.1-201ENST00000616756 179 ntBASIC3.87□□□□□ -1.79
ZIC3O60481 AC000123.2-201ENST00000623124 461 ntBASIC3.87□□□□□ -1.79
ZIC3O60481 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.87□□□□□ -1.79
ZIC3O60481 AC008013.2-202ENST00000637965 364 ntBASIC3.87□□□□□ -1.79
ZIC3O60481 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.87□□□□□ -1.79
ZIC3O60481 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
ZIC3O60481 AC009951.1-201ENST00000623674 2614 ntBASIC3.87□□□□□ -1.79
ZIC3O60481 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ZIC3O60481 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
ZIC3O60481 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
ZIC3O60481 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ZIC3O60481 AL022578.1-201ENST00000439330 1433 ntBASIC3.87□□□□□ -1.79
ZIC3O60481 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ZIC3O60481 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZIC3O60481 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZIC3O60481 AC092435.4-201ENST00000623012 4159 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZIC3O60481 Z95327.2-201ENST00000414579 1873 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.86□□□□□ -1.79
ZIC3O60481 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ZIC3O60481 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZIC3O60481 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ZIC3O60481 SNORA70.2-201ENST00000364506 135 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AL049693.1-201ENST00000402760 611 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AC004987.3-201ENST00000413879 771 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 HMGB1P11-201ENST00000413899 637 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.86□□□□□ -1.79
ZIC3O60481 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.86□□□□□ -1.79
ZIC3O60481 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.86□□□□□ -1.79
ZIC3O60481 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.86□□□□□ -1.79
ZIC3O60481 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.86□□□□□ -1.79
ZIC3O60481 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.86□□□□□ -1.79
ZIC3O60481 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.86□□□□□ -1.79
ZIC3O60481 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.86□□□□□ -1.79
ZIC3O60481 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.86□□□□□ -1.79
ZIC3O60481 AL831737.1-201ENST00000441288 271 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.86□□□□□ -1.79
ZIC3O60481 ABCF2P2-201ENST00000450549 296 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 BX276092.4-201ENST00000452056 248 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.86□□□□□ -1.79
ZIC3O60481 SNRPGP9-201ENST00000456025 225 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.86□□□□□ -1.79
ZIC3O60481 RNU6-956P-201ENST00000458868 103 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 RPL37P6-202ENST00000464216 403 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AC104164.2-201ENST00000496953 495 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.86□□□□□ -1.79
ZIC3O60481 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.86□□□□□ -1.79
ZIC3O60481 AC021146.3-201ENST00000511911 260 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 RN7SKP277-201ENST00000516895 283 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.86□□□□□ -1.79
ZIC3O60481 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.86□□□□□ -1.79
ZIC3O60481 PHBP17-201ENST00000528576 541 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.86□□□□□ -1.79
ZIC3O60481 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.86□□□□□ -1.79
ZIC3O60481 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.86□□□□□ -1.79
ZIC3O60481 AC068446.3-201ENST00000555285 382 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AC025884.1-201ENST00000556034 378 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 TVP23BP1-201ENST00000557500 617 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AC006362.1-201ENST00000567392 174 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 RN7SL176P-201ENST00000580352 264 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.86□□□□□ -1.79
ZIC3O60481 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.86□□□□□ -1.79
ZIC3O60481 AP000403.1-201ENST00000603349 851 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AC128687.1-201ENST00000605304 619 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AC080013.4-201ENST00000607624 649 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AC103591.3-201ENST00000608684 209 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AC090425.2-201ENST00000608818 501 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.86□□□□□ -1.79
ZIC3O60481 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AC009318.4-201ENST00000620496 486 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ZIC3O60481 AC092656.1-203ENST00000624134 423 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AC025048.6-202ENST00000627667 438 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 CYP3A51P-201ENST00000633513 256 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
ZIC3O60481 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
ZIC3O60481 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZIC3O60481 GDI2P1-201ENST00000429312 1336 ntBASIC3.86□□□□□ -1.79
ZIC3O60481 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ZIC3O60481 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms