Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN3O15551 AC011611.1-201ENST00000552179 197 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN3O15551 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN3O15551 AC124283.4-201ENST00000581815 456 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
CLDN3O15551 AC067852.3-201ENST00000589177 561 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.73□□□□□ -1.81
CLDN3O15551 AL020997.3-201ENST00000602843 359 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 AC113368.1-201ENST00000603736 382 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 AC025588.3-201ENST00000604182 274 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 AC009948.4-201ENST00000604692 675 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN3O15551 AC020923.1-201ENST00000624021 917 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 ZNF734P-201ENST00000419494 1534 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN3O15551 AP001148.1-201ENST00000624124 2359 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN3O15551 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN3O15551 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN3O15551 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CLDN3O15551 OR1AA1P-201ENST00000419597 916 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 AP000907.1-201ENST00000428428 510 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN3O15551 CDC42P1-201ENST00000456658 548 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 RPL23AP67-201ENST00000465341 474 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 SNRPGP3-201ENST00000469405 227 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN3O15551 AC093663.1-201ENST00000497190 394 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.72□□□□□ -1.81
CLDN3O15551 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN3O15551 MTND2P31-201ENST00000512602 616 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN3O15551 RNU6-334P-201ENST00000517072 102 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 NDUFB9P3-201ENST00000521269 501 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN3O15551 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN3O15551 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN3O15551 AP003049.1-201ENST00000529418 457 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN3O15551 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN3O15551 AC074050.1-201ENST00000563247 211 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN3O15551 AC074051.3-201ENST00000570238 358 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 MIR4789-201ENST00000577469 82 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 MIR4425-201ENST00000580572 84 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN3O15551 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN3O15551 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN3O15551 AC005776.1-201ENST00000603164 290 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 AL034351.1-201ENST00000605288 668 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 AC013468.1-201ENST00000608680 598 ntBASIC3.72□□□□□ -1.81
CLDN3O15551 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN3O15551 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN3O15551 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN3O15551 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN3O15551 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CLDN3O15551 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN3O15551 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN3O15551 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN3O15551 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
CLDN3O15551 SNORA51.2-201ENST00000364595 132 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 OR6K3-202ENST00000368146 996 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CLDN3O15551 MIR34B-201ENST00000385076 84 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CLDN3O15551 RNU4-78P-201ENST00000410940 126 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 RNU2-72P-201ENST00000411175 163 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 BX323014.1-201ENST00000412876 237 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN3O15551 AC233981.1-201ENST00000423224 461 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN3O15551 MTCO2P1-201ENST00000424648 477 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN3O15551 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.71□□□□□ -1.82
CLDN3O15551 AC234064.1-201ENST00000436312 247 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CLDN3O15551 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN3O15551 AC097262.1-201ENST00000452559 548 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 AC008155.2-201ENST00000464337 397 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 RPL31P13-201ENST00000484151 370 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 AC011352.3-201ENST00000505162 593 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN3O15551 ARL2BPP6-201ENST00000512757 439 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.71□□□□□ -1.82
CLDN3O15551 RN7SKP244-201ENST00000516513 307 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN3O15551 OR4A45P-201ENST00000529954 901 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN3O15551 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CLDN3O15551 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN3O15551 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN3O15551 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN3O15551 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN3O15551 AP002906.1-201ENST00000603405 233 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 RMST_8.1-201ENST00000610287 165 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 AL592295.2-201ENST00000612578 206 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 AC105227.2-201ENST00000615075 605 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 AC073592.7-201ENST00000623659 507 ntBASIC3.71□□□□□ -1.82
CLDN3O15551 AC097372.4-201ENST00000625025 466 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms