Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN1O15353 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXN1O15353 USP12PX-201ENST00000432383 1057 ntBASIC5.07□□□□□ -1.6
FOXN1O15353 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXN1O15353 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.07□□□□□ -1.6
FOXN1O15353 NANOGNBP1-201ENST00000448444 480 ntBASIC5.07□□□□□ -1.6
FOXN1O15353 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXN1O15353 UBDP1-202ENST00000457888 382 ntBASIC5.07□□□□□ -1.6
FOXN1O15353 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXN1O15353 AL121769.1-201ENST00000469473 401 ntBASIC5.07□□□□□ -1.6
FOXN1O15353 AC098583.1-201ENST00000480875 255 ntBASIC5.07□□□□□ -1.6
FOXN1O15353 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.07□□□□□ -1.6
FOXN1O15353 RN7SKP141-201ENST00000516167 338 ntBASIC5.07□□□□□ -1.6
FOXN1O15353 RNU1-95P-201ENST00000516357 160 ntBASIC5.07□□□□□ -1.6
FOXN1O15353 RNU6-506P-201ENST00000516553 94 ntBASIC5.07□□□□□ -1.6
FOXN1O15353 RNU1-128P-201ENST00000516704 160 ntBASIC5.07□□□□□ -1.6
FOXN1O15353 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXN1O15353 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN1O15353 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXN1O15353 AC009063.1-201ENST00000563342 702 ntBASIC5.07□□□□□ -1.6
FOXN1O15353 MTCO1P40-201ENST00000574371 625 ntBASIC5.07□□□□□ -1.6
FOXN1O15353 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.07□□□□□ -1.6
FOXN1O15353 AC073569.3-201ENST00000619055 682 ntBASIC5.07□□□□□ -1.6
FOXN1O15353 AC091905.2-201ENST00000623143 306 ntBASIC5.07□□□□□ -1.6
FOXN1O15353 OR5H6-203ENST00000642105 978 ntBASIC5.07□□□□□ -1.6
FOXN1O15353 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
FOXN1O15353 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN1O15353 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN1O15353 AC139769.1-204ENST00000472297 1931 ntBASIC5.07□□□□□ -1.6
FOXN1O15353 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN1O15353 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
FOXN1O15353 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
FOXN1O15353 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
FOXN1O15353 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN1O15353 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXN1O15353 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN1O15353 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXN1O15353 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXN1O15353 AL354685.2-201ENST00000448218 1447 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN1O15353 DDX18P4-201ENST00000511690 1966 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN1O15353 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN1O15353 FGF7P2-201ENST00000332473 296 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 RNU4-76P-201ENST00000364509 141 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN1O15353 XGY1-201ENST00000381172 446 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
FOXN1O15353 RNU6-259P-201ENST00000383999 107 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 SNORA5A-201ENST00000384111 134 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 AL583835.1-201ENST00000399570 407 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 RNU2-41P-201ENST00000410991 178 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN1O15353 BTF3P9-201ENST00000418784 283 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXN1O15353 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXN1O15353 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.06□□□□□ -1.6
FOXN1O15353 MTCO2P11-201ENST00000431069 680 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 AL662791.1-201ENST00000441992 928 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 RAB11AP1-201ENST00000442978 646 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 AL353898.1-201ENST00000444055 238 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN1O15353 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN1O15353 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN1O15353 RN7SL429P-201ENST00000479090 223 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 RN7SL489P-201ENST00000486185 223 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 RN7SL327P-201ENST00000488659 223 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.06□□□□□ -1.6
FOXN1O15353 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN1O15353 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXN1O15353 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN1O15353 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN1O15353 AC010587.2-201ENST00000511727 448 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXN1O15353 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN1O15353 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXN1O15353 ZNF519P2-201ENST00000557032 169 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.06□□□□□ -1.6
FOXN1O15353 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.06□□□□□ -1.6
FOXN1O15353 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN1O15353 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.06□□□□□ -1.6
FOXN1O15353 BMS1P7-201ENST00000602440 1052 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 AC015871.2-201ENST00000603605 948 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 AC068276.1-201ENST00000605793 379 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXN1O15353 AL121757.2-201ENST00000611223 313 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 Y_RNA.804-201ENST00000615262 101 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 RN7SL853P-201ENST00000617250 223 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 AL357080.1-201ENST00000617394 239 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 AC023509.5-201ENST00000617434 807 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.06□□□□□ -1.6
FOXN1O15353 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXN1O15353 AC116618.1-201ENST00000634617 774 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 AF001550.2-201ENST00000636643 217 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 AC073869.7-201ENST00000640874 297 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN1O15353 CPHL1P-201ENST00000461341 3407 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 MTCO1P12-201ENST00000414273 1543 ntBASIC5.06□□□□□ -1.6
FOXN1O15353 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN1O15353 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms