Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC048346.1-201ENST00000510247 144 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 RNU6-276P-201ENST00000516114 96 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 SNORA19.3-201ENST00000516165 130 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 RNU6-1028P-201ENST00000517164 93 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 AC023632.1-201ENST00000518463 375 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 AC010376.1-201ENST00000522101 334 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM1O00151 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM1O00151 OR8I1P-201ENST00000529291 931 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM1O00151 LRRC6P1-201ENST00000532188 885 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM1O00151 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM1O00151 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.52□□□□□ -1.85
PDLIM1O00151 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM1O00151 AC010928.3-201ENST00000587712 541 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 AL606834.3-201ENST00000602615 496 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 YWHAQP7-201ENST00000603536 658 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 AL451074.6-201ENST00000608512 729 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 AC019176.2-201ENST00000611579 315 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 U73479.1-201ENST00000618062 168 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 AC073530.2-201ENST00000623987 261 ntBASIC3.52□□□□□ -1.85
PDLIM1O00151 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.52□□□□□ -1.85
PDLIM1O00151 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.52□□□□□ -1.85
PDLIM1O00151 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM1O00151 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM1O00151 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM1O00151 ANKRD36P1-201ENST00000344424 659 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 RN7SKP280-201ENST00000364196 304 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 RNU6-619P-201ENST00000365146 108 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PDLIM1O00151 Y_RNA.578-201ENST00000390903 88 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM1O00151 RNA5SP107-201ENST00000411358 122 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.51□□□□□ -1.85
PDLIM1O00151 USP9YP21-201ENST00000420603 432 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM1O00151 HIGD1AP12-201ENST00000427832 281 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.51□□□□□ -1.85
PDLIM1O00151 AL590399.6-201ENST00000446396 307 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.51□□□□□ -1.85
PDLIM1O00151 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PDLIM1O00151 U3.44-201ENST00000458938 192 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PDLIM1O00151 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.51□□□□□ -1.85
PDLIM1O00151 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 NCOR1P1-202ENST00000486162 291 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 AC005726.1-201ENST00000494679 427 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.51□□□□□ -1.85
PDLIM1O00151 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.51□□□□□ -1.85
PDLIM1O00151 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM1O00151 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 NDUFA5P2-201ENST00000519723 344 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.51□□□□□ -1.85
PDLIM1O00151 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.51□□□□□ -1.85
PDLIM1O00151 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.51□□□□□ -1.85
PDLIM1O00151 OR8K4P-201ENST00000534608 872 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.51□□□□□ -1.85
PDLIM1O00151 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.51□□□□□ -1.85
PDLIM1O00151 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.51□□□□□ -1.85
PDLIM1O00151 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.51□□□□□ -1.85
PDLIM1O00151 AC122134.1-202ENST00000569111 1201 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM1O00151 AC034268.2-201ENST00000571784 482 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.51□□□□□ -1.85
PDLIM1O00151 VN1R85P-201ENST00000601587 426 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 AL022067.1-201ENST00000602426 454 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.51□□□□□ -1.85
PDLIM1O00151 AL445435.1-201ENST00000604232 665 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
PDLIM1O00151 AC024941.1-201ENST00000612250 334 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.51□□□□□ -1.85
PDLIM1O00151 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.51□□□□□ -1.85
PDLIM1O00151 AL445984.1-201ENST00000637834 659 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PDLIM1O00151 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.51□□□□□ -1.85
PDLIM1O00151 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM1O00151 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
PDLIM1O00151 ELL2P4-201ENST00000446870 1376 ntBASIC3.51□□□□□ -1.85
PDLIM1O00151 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.5□□□□□ -1.85
PDLIM1O00151 FAM35CP-201ENST00000554755 2470 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.5□□□□□ -1.85
PDLIM1O00151 SNORA31-201ENST00000362607 130 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
PDLIM1O00151 RNU6-213P-201ENST00000384051 104 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 RNU6-925P-201ENST00000384629 104 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 MIR199A2-201ENST00000385289 110 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 AP000567.1-201ENST00000406413 156 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.5□□□□□ -1.85
PDLIM1O00151 MTND4P3-201ENST00000417829 541 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.5□□□□□ -1.85
PDLIM1O00151 AC092017.2-201ENST00000427600 362 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 MTCYBP32-201ENST00000427945 1084 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 RPL21P112-201ENST00000434403 463 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.5□□□□□ -1.85
PDLIM1O00151 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.5□□□□□ -1.85
PDLIM1O00151 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.5□□□□□ -1.85
PDLIM1O00151 NDUFA5P7-201ENST00000452914 242 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms