Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 AC002525.1-201ENST00000624392 1622 ntBASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 AC073343.1-201ENST00000328239 651 ntBASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 Z97832.1-201ENST00000402490 328 ntBASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 ARL4AP5-201ENST00000404372 599 ntBASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 FAT1P1-201ENST00000406588 507 ntBASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 RNU2-39P-201ENST00000410604 198 ntBASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 SRIP2-201ENST00000428470 166 ntBASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 TDGF1P1-201ENST00000445734 527 ntBASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 AP000797.2-201ENST00000475768 606 ntBASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 RPS3AP50-201ENST00000487064 803 ntBASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 RN7SL244P-201ENST00000493405 297 ntBASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 RNU4-29P-201ENST00000515943 174 ntBASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 SNORA19.2-201ENST00000516013 114 ntBASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 NCAPGP2-201ENST00000557911 754 ntBASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 AC090971.4-201ENST00000560291 1800 ntBASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 AC092747.4-201ENST00000620519 1861 ntBASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.22□□□□□ -1.41
TMEM88BA6NKF7 AL591135.1-201ENST00000401578 5914 ntBASIC6.21□□□□□ -1.41
TMEM88BA6NKF7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.41
TMEM88BA6NKF7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
TMEM88BA6NKF7 TTC41P-205ENST00000551270 3963 ntBASIC6.21□□□□□ -1.41
TMEM88BA6NKF7 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
TMEM88BA6NKF7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.41
TMEM88BA6NKF7 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 RNA5SP515-201ENST00000364570 118 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 SNORA51.2-201ENST00000364595 132 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 RNU6-821P-201ENST00000390995 107 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 RNU6-332P-201ENST00000391193 108 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AL356432.1-201ENST00000405809 419 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 RNA5SP113-201ENST00000410486 84 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 RN7SKP140-201ENST00000411196 284 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 CYCSP10-201ENST00000417973 294 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 RPS27AP12-201ENST00000429552 465 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 MTND6P18-201ENST00000439477 513 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 GEMIN8P3-201ENST00000445417 720 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AC234775.1-201ENST00000454247 670 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AC083829.1-201ENST00000503756 657 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AC116562.3-201ENST00000506136 177 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 RN7SKP116-201ENST00000516902 319 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AC012400.1-201ENST00000518452 381 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AC103783.1-201ENST00000520506 373 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AC068587.5-201ENST00000528506 175 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 OR8L1P-201ENST00000534005 955 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AL163952.1-202ENST00000569625 600 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AC067852.5-201ENST00000589299 310 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AL031176.1-201ENST00000604554 466 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AL031666.3-201ENST00000609320 1006 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AC103710.2-201ENST00000609912 942 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AL138820.1-201ENST00000617901 5305 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 AC144833.1-201ENST00000567953 4089 ntBASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TMEM88BA6NKF7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.2□□□□□ -1.42
TMEM88BA6NKF7 AL450326.2-201ENST00000421913 1962 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms