Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC112230.1-201ENST00000604342 547 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC011626.1-201ENST00000604710 562 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC090578.1-201ENST00000604955 591 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC010680.4-201ENST00000605334 543 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AL391358.1-201ENST00000605342 190 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC104010.1-201ENST00000616889 150 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC073534.2-201ENST00000620377 381 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 FARSBP1-201ENST00000435808 1778 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC009951.1-201ENST00000623674 2614 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 MFSD8-216ENST00000641147 4009 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 Z73965.1-201ENST00000623412 2297 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 Y_RNA.234-201ENST00000364409 97 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 RNU6-259P-201ENST00000383999 107 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 U3.29-201ENST00000391296 212 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AL080315.1-201ENST00000406055 466 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 RPS16P5-201ENST00000406501 404 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 FCF1P10-201ENST00000407590 479 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 RNA5SP113-201ENST00000410486 84 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AL359704.1-201ENST00000411586 781 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 PGBD4P3-201ENST00000440731 581 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 RN7SL443P-201ENST00000464331 290 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 KLF3P2-201ENST00000465138 268 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AC063943.1-201ENST00000465434 453 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 RN7SL814P-201ENST00000487715 300 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 RPL23AP72-201ENST00000492447 435 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 HMGB3P16-201ENST00000508037 287 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 OR7H2P-201ENST00000513483 306 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 RN7SKP46-201ENST00000515942 234 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AF186190.1-201ENST00000517470 480 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 MTND1P5-201ENST00000517906 940 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 EEF1B2P4-201ENST00000551398 348 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AL022154.1-201ENST00000604698 785 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AL021997.1-201ENST00000605757 193 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 RNU6-87P-201ENST00000607561 108 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AC008498.1-201ENST00000613012 531 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AC099669.2-201ENST00000616549 437 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AP000346.3-201ENST00000622821 210 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AC027514.1-201ENST00000588561 1603 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 AC027287.1-201ENST00000553115 1453 ntBASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA3Q9Y5H0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 RNU6-398P-201ENST00000384143 109 ntBASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 RNU6-1207P-201ENST00000384343 107 ntBASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 RNU6-821P-201ENST00000390995 107 ntBASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AC119751.6-201ENST00000416712 186 ntBASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AC005517.2-201ENST00000424673 553 ntBASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AC073264.2-201ENST00000448886 166 ntBASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 RN7SL481P-201ENST00000477764 299 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms