Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
SHANK2Q9UPX8 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.04□□□□□ -1.76
SHANK2Q9UPX8 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHANK2Q9UPX8 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SHANK2Q9UPX8 TRAV37-201ENST00000553906 342 ntBASIC4.04□□□□□ -1.76
SHANK2Q9UPX8 MIR7153-201ENST00000637758 57 ntBASIC4.04□□□□□ -1.76
SHANK2Q9UPX8 AC099063.3-201ENST00000642066 185 ntBASIC4.04□□□□□ -1.76
SHANK2Q9UPX8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 Y_RNA.4-201ENST00000362333 112 ntBASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 Y_RNA.226-201ENST00000364337 114 ntBASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 MIR518C-201ENST00000384822 101 ntBASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 AL159169.1-201ENST00000421119 127 ntBASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 RPS26P24-201ENST00000497656 331 ntBASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 AC118282.1-201ENST00000506408 765 ntBASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 AC119751.1-201ENST00000513357 765 ntBASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 ZNF861P-201ENST00000588126 639 ntBASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 AC078899.3-201ENST00000599065 212 ntBASIC4.03□□□□□ -1.76
SHANK2Q9UPX8 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
SHANK2Q9UPX8 ZNF72P-201ENST00000425869 1908 ntBASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 RPS3AP26-201ENST00000398259 784 ntBASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 ATF1P1-201ENST00000406040 927 ntBASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 TRGV5P-201ENST00000419915 354 ntBASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 AL592437.1-201ENST00000443781 492 ntBASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 SRIP1-201ENST00000489235 288 ntBASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 HPRT1P3-201ENST00000539521 576 ntBASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 AL109741.3-201ENST00000561748 592 ntBASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 AC122134.1-201ENST00000565664 1104 ntBASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 MIR3605-201ENST00000583214 100 ntBASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 DLEU2_6.1-201ENST00000610536 112 ntBASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 AL354950.1-201ENST00000614150 568 ntBASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 Z99129.2-201ENST00000619967 314 ntBASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SHANK2Q9UPX8 RNU6-618P-201ENST00000363518 112 ntBASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 SNORA68.2-201ENST00000391263 128 ntBASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 RPS27P29-201ENST00000463110 252 ntBASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 AC107015.1-201ENST00000466902 747 ntBASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 RPL23AP14-201ENST00000468281 468 ntBASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 RNA5SP320-201ENST00000516263 124 ntBASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 DNAJC19P3-201ENST00000594491 331 ntBASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 AC008277.2-201ENST00000605196 797 ntBASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.01□□□□□ -1.77
SHANK2Q9UPX8 5S_rRNA.2-201ENST00000391293 112 ntBASIC4□□□□□ -1.77
SHANK2Q9UPX8 MTND6P18-201ENST00000439477 513 ntBASIC4□□□□□ -1.77
SHANK2Q9UPX8 EXTL2P1-201ENST00000446218 416 ntBASIC4□□□□□ -1.77
SHANK2Q9UPX8 RNU7-170P-201ENST00000459303 61 ntBASIC4□□□□□ -1.77
SHANK2Q9UPX8 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4□□□□□ -1.77
SHANK2Q9UPX8 SNORA9.3-201ENST00000516383 129 ntBASIC4□□□□□ -1.77
SHANK2Q9UPX8 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4□□□□□ -1.77
SHANK2Q9UPX8 PDCL2P2-201ENST00000533651 189 ntBASIC4□□□□□ -1.77
SHANK2Q9UPX8 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHANK2Q9UPX8 AL442163.2-201ENST00000553912 710 ntBASIC4□□□□□ -1.77
SHANK2Q9UPX8 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4□□□□□ -1.77
SHANK2Q9UPX8 AC092608.2-201ENST00000624427 218 ntBASIC4□□□□□ -1.77
SHANK2Q9UPX8 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4□□□□□ -1.77
SHANK2Q9UPX8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4□□□□□ -1.77
SHANK2Q9UPX8 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHANK2Q9UPX8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SHANK2Q9UPX8 AC093908.1-201ENST00000623125 8092 ntBASIC4□□□□□ -1.77
SHANK2Q9UPX8 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHANK2Q9UPX8 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SHANK2Q9UPX8 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.99□□□□□ -1.77
SHANK2Q9UPX8 RNA5SP289-201ENST00000362332 137 ntBASIC3.99□□□□□ -1.77
SHANK2Q9UPX8 AL079342.1-201ENST00000401460 267 ntBASIC3.99□□□□□ -1.77
SHANK2Q9UPX8 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.99□□□□□ -1.77
SHANK2Q9UPX8 RN7SKP223-201ENST00000410582 62 ntBASIC3.99□□□□□ -1.77
SHANK2Q9UPX8 AC073136.2-201ENST00000417282 849 ntBASIC3.99□□□□□ -1.77
SHANK2Q9UPX8 RPS20P5-201ENST00000434808 360 ntBASIC3.99□□□□□ -1.77
SHANK2Q9UPX8 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.99□□□□□ -1.77
SHANK2Q9UPX8 RPS27AP9-201ENST00000477681 438 ntBASIC3.99□□□□□ -1.77
SHANK2Q9UPX8 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.99□□□□□ -1.77
SHANK2Q9UPX8 KCTD9P5-201ENST00000504141 1170 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms