Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 MIR525-201ENST00000384978 85 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 RNU6-1093P-201ENST00000391194 107 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AC005042.1-201ENST00000393397 800 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AL390316.1-201ENST00000406279 553 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 MIR1302-6-201ENST00000408466 90 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 UBE2FP1-201ENST00000416536 447 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 RPL7L1P9-201ENST00000431298 745 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AF228730.2-201ENST00000438784 848 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 CEACAMP7-201ENST00000444105 496 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AC073522.1-201ENST00000483312 377 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AC013356.1-201ENST00000489027 564 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 HMGB1P35-201ENST00000503360 598 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 RNU6-273P-201ENST00000516937 96 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AC131281.1-201ENST00000522984 164 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 GNAI2P1-201ENST00000541815 315 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 RN7SL708P-201ENST00000580952 299 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AC012409.4-201ENST00000612923 249 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 AC007842.1-201ENST00000597336 2039 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 ERCC6-202ENST00000374127 1782 ntBASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PDZRN3Q9UPQ7 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AC104964.3-201ENST00000606115 2860 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 RNU6-216P-201ENST00000363282 104 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 Y_RNA.478-201ENST00000384358 107 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 MIR550A3-201ENST00000390735 95 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 RPL11P3-201ENST00000395256 523 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 RNU6-101P-201ENST00000410323 104 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 RPL37P18-201ENST00000411602 243 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AC096921.1-201ENST00000411661 375 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AL357752.1-201ENST00000412817 349 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 RPL21P24-201ENST00000413752 448 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 NENFP1-201ENST00000419476 466 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 RPL21P2-201ENST00000440049 481 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 RPL12P3-201ENST00000440080 396 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 MRE11P1-201ENST00000464884 2127 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 RPL32P33-201ENST00000487023 394 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 DUTP1-201ENST00000493631 470 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AC008953.1-201ENST00000497334 318 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AC139365.2-201ENST00000517972 253 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AC022559.1-201ENST00000520905 205 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AC083923.1-201ENST00000523708 376 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 HMGB3P26-201ENST00000560051 582 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AL133338.2-201ENST00000604292 736 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 OR10AB1P-201ENST00000609613 938 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 MIR6748-201ENST00000610433 71 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 EIF3FP1-201ENST00000613970 806 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 CUL4AP1-201ENST00000514750 1863 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AC018628.1-201ENST00000624147 3819 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 AC239868.2-201ENST00000564237 4527 ntBASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.17□□□□□ -1.26
PDZRN3Q9UPQ7 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms