Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SCN11AQ9UI33 RNA5SP247-201ENST00000411181 105 ntBASIC3.42□□□□□ -1.86
SCN11AQ9UI33 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.42□□□□□ -1.86
SCN11AQ9UI33 AL451074.5-201ENST00000415894 435 ntBASIC3.42□□□□□ -1.86
SCN11AQ9UI33 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.42□□□□□ -1.86
SCN11AQ9UI33 RPS27P29-201ENST00000463110 252 ntBASIC3.42□□□□□ -1.86
SCN11AQ9UI33 PDCD5P1-201ENST00000543528 309 ntBASIC3.42□□□□□ -1.86
SCN11AQ9UI33 AC025754.2-201ENST00000606491 432 ntBASIC3.42□□□□□ -1.86
SCN11AQ9UI33 CR381653.2-201ENST00000624041 768 ntBASIC3.42□□□□□ -1.86
SCN11AQ9UI33 AC016717.2-201ENST00000609089 5141 ntBASIC3.42□□□□□ -1.86
SCN11AQ9UI33 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SCN11AQ9UI33 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SCN11AQ9UI33 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN11AQ9UI33 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SCN11AQ9UI33 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SCN11AQ9UI33 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN11AQ9UI33 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN11AQ9UI33 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.41□□□□□ -1.86
SCN11AQ9UI33 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.41□□□□□ -1.86
SCN11AQ9UI33 EEF1A1P37-201ENST00000522748 715 ntBASIC3.41□□□□□ -1.86
SCN11AQ9UI33 AP003122.3-201ENST00000526316 255 ntBASIC3.41□□□□□ -1.86
SCN11AQ9UI33 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.41□□□□□ -1.86
SCN11AQ9UI33 AL355836.1-201ENST00000555951 870 ntBASIC3.41□□□□□ -1.86
SCN11AQ9UI33 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.41□□□□□ -1.86
SCN11AQ9UI33 AC083760.1-201ENST00000589621 670 ntBASIC3.41□□□□□ -1.86
SCN11AQ9UI33 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.41□□□□□ -1.86
SCN11AQ9UI33 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SCN11AQ9UI33 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.41□□□□□ -1.86
SCN11AQ9UI33 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.41□□□□□ -1.86
SCN11AQ9UI33 MTND5P19-201ENST00000424872 1794 ntBASIC3.41□□□□□ -1.86
SCN11AQ9UI33 U8.2-201ENST00000363156 134 ntBASIC3.4□□□□□ -1.86
SCN11AQ9UI33 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.4□□□□□ -1.86
SCN11AQ9UI33 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.4□□□□□ -1.86
SCN11AQ9UI33 IFNA11P-201ENST00000446352 526 ntBASIC3.4□□□□□ -1.86
SCN11AQ9UI33 SNRPGP5-201ENST00000456003 220 ntBASIC3.4□□□□□ -1.86
SCN11AQ9UI33 TXNP6-201ENST00000510190 310 ntBASIC3.4□□□□□ -1.86
SCN11AQ9UI33 SNORA9.3-201ENST00000516383 129 ntBASIC3.4□□□□□ -1.86
SCN11AQ9UI33 HPRT1P3-201ENST00000539521 576 ntBASIC3.4□□□□□ -1.86
SCN11AQ9UI33 AL391156.1-201ENST00000554965 554 ntBASIC3.4□□□□□ -1.86
SCN11AQ9UI33 AL158827.2-201ENST00000602494 330 ntBASIC3.4□□□□□ -1.86
SCN11AQ9UI33 AL691447.3-201ENST00000635020 330 ntBASIC3.4□□□□□ -1.86
SCN11AQ9UI33 AC134882.1-201ENST00000603738 1676 ntBASIC3.4□□□□□ -1.87
SCN11AQ9UI33 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SCN11AQ9UI33 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SCN11AQ9UI33 RN7SKP223-201ENST00000410582 62 ntBASIC3.4□□□□□ -1.87
SCN11AQ9UI33 AC105402.1-201ENST00000413336 545 ntBASIC3.4□□□□□ -1.87
SCN11AQ9UI33 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.4□□□□□ -1.87
SCN11AQ9UI33 RNU6-991P-201ENST00000516168 107 ntBASIC3.4□□□□□ -1.87
SCN11AQ9UI33 ATP5F1P5-201ENST00000526403 760 ntBASIC3.4□□□□□ -1.87
SCN11AQ9UI33 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.4□□□□□ -1.87
SCN11AQ9UI33 CTSLP2-204ENST00000629029 392 ntBASIC3.4□□□□□ -1.87
SCN11AQ9UI33 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SCN11AQ9UI33 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SCN11AQ9UI33 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.4□□□□□ -1.87
SCN11AQ9UI33 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.39□□□□□ -1.87
SCN11AQ9UI33 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SCN11AQ9UI33 MIR181A2-201ENST00000384863 110 ntBASIC3.39□□□□□ -1.87
SCN11AQ9UI33 FCF1P1-201ENST00000432690 571 ntBASIC3.39□□□□□ -1.87
SCN11AQ9UI33 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.39□□□□□ -1.87
SCN11AQ9UI33 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.39□□□□□ -1.87
SCN11AQ9UI33 AC005921.1-201ENST00000510589 286 ntBASIC3.39□□□□□ -1.87
SCN11AQ9UI33 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.39□□□□□ -1.87
SCN11AQ9UI33 RPL7P20-201ENST00000520308 745 ntBASIC3.39□□□□□ -1.87
SCN11AQ9UI33 AC100870.1-201ENST00000522035 505 ntBASIC3.39□□□□□ -1.87
SCN11AQ9UI33 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.39□□□□□ -1.87
SCN11AQ9UI33 UBTFL10-201ENST00000528532 562 ntBASIC3.39□□□□□ -1.87
SCN11AQ9UI33 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.39□□□□□ -1.87
SCN11AQ9UI33 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.39□□□□□ -1.87
SCN11AQ9UI33 DNAJC19P3-201ENST00000594491 331 ntBASIC3.39□□□□□ -1.87
SCN11AQ9UI33 AC241585.2-209ENST00000638217 143 ntBASIC3.39□□□□□ -1.87
SCN11AQ9UI33 AC095050.2-201ENST00000510748 1458 ntBASIC3.39□□□□□ -1.87
SCN11AQ9UI33 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
SCN11AQ9UI33 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SCN11AQ9UI33 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
SCN11AQ9UI33 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SCN11AQ9UI33 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.39□□□□□ -1.87
SCN11AQ9UI33 RAD1P1-201ENST00000231383 813 ntBASIC3.38□□□□□ -1.87
SCN11AQ9UI33 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SCN11AQ9UI33 MIR518C-201ENST00000384822 101 ntBASIC3.38□□□□□ -1.87
SCN11AQ9UI33 ATP5F1P6-201ENST00000402768 767 ntBASIC3.38□□□□□ -1.87
SCN11AQ9UI33 RPLP0P7-201ENST00000416050 667 ntBASIC3.38□□□□□ -1.87
SCN11AQ9UI33 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.38□□□□□ -1.87
SCN11AQ9UI33 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.38□□□□□ -1.87
SCN11AQ9UI33 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.38□□□□□ -1.87
SCN11AQ9UI33 ATP5F1P7-201ENST00000567330 760 ntBASIC3.38□□□□□ -1.87
SCN11AQ9UI33 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.38□□□□□ -1.87
SCN11AQ9UI33 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SCN11AQ9UI33 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SCN11AQ9UI33 SNORA70E-201ENST00000384492 135 ntBASIC3.38□□□□□ -1.87
SCN11AQ9UI33 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.38□□□□□ -1.87
SCN11AQ9UI33 RWDD4P2-201ENST00000426392 563 ntBASIC3.38□□□□□ -1.87
SCN11AQ9UI33 RPL23AP23-201ENST00000452590 471 ntBASIC3.38□□□□□ -1.87
SCN11AQ9UI33 RWDD4P1-201ENST00000488019 565 ntBASIC3.38□□□□□ -1.87
SCN11AQ9UI33 AC021146.5-201ENST00000503544 545 ntBASIC3.38□□□□□ -1.87
SCN11AQ9UI33 AC008837.1-201ENST00000511513 412 ntBASIC3.38□□□□□ -1.87
SCN11AQ9UI33 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SCN11AQ9UI33 AC009163.5-201ENST00000575421 637 ntBASIC3.38□□□□□ -1.87
SCN11AQ9UI33 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.38□□□□□ -1.87
SCN11AQ9UI33 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.38□□□□□ -1.87
SCN11AQ9UI33 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms