Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNU6-463P-201ENST00000384340 107 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 RNU6-171P-201ENST00000384354 107 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 AC092832.1-201ENST00000422934 400 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 COX6CP15-201ENST00000426313 211 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 OR4K11P-201ENST00000431829 904 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 NANOGP10-201ENST00000453325 895 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 AL590639.1-201ENST00000456484 337 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 Y_RNA.635-201ENST00000459041 101 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 SNRPCP3-201ENST00000474888 476 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 RPL23AP11-201ENST00000475260 469 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 RPL5P22-201ENST00000480199 884 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 PGAM1P13-201ENST00000507497 754 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 AC104057.1-201ENST00000515547 497 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 AC068993.1-201ENST00000546724 589 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 AL049779.2-201ENST00000553847 315 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 OR4K8P-201ENST00000578842 1048 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 AP005403.1-201ENST00000579720 229 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 MIR1269B-201ENST00000580405 75 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 AC060771.1-201ENST00000582031 164 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 CYP2C61P-201ENST00000604072 290 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 AC080078.3-201ENST00000605407 463 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 AL080274.1-201ENST00000605565 220 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 AL512329.2-201ENST00000607350 548 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 uc_338.15-201ENST00000615470 191 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNTN3Q9P232 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CNTN3Q9P232 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNTN3Q9P232 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNTN3Q9P232 STX3-208ENST00000641815 3236 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.9□□□□□ -1.46
CNTN3Q9P232 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CNTN3Q9P232 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CNTN3Q9P232 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CNTN3Q9P232 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.9□□□□□ -1.46
CNTN3Q9P232 AC144833.1-201ENST00000567953 4089 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 AC011493.1-201ENST00000596753 1632 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 OR1S2-201ENST00000302592 978 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 Y_RNA.234-201ENST00000364409 97 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CNTN3Q9P232 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.9□□□□□ -1.46
CNTN3Q9P232 RNU6-639P-201ENST00000384074 107 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CNTN3Q9P232 AL161631.1-201ENST00000417933 486 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 RPS26P47-201ENST00000427219 348 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 RPL12P17-201ENST00000432393 498 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.9□□□□□ -1.46
CNTN3Q9P232 LINC02210-201ENST00000444561 288 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 RPL7P52-201ENST00000449200 742 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.9□□□□□ -1.46
CNTN3Q9P232 AP001992.1-205ENST00000462248 379 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 RN7SL188P-201ENST00000469842 285 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 AC021382.1-201ENST00000483523 359 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.9□□□□□ -1.46
CNTN3Q9P232 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.9□□□□□ -1.46
CNTN3Q9P232 RFPL4AP5-201ENST00000514977 504 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 RNA5SP228-201ENST00000516232 133 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.9□□□□□ -1.46
CNTN3Q9P232 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.9□□□□□ -1.46
CNTN3Q9P232 AC100784.1-201ENST00000522790 310 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 AL355836.1-201ENST00000555951 870 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CNTN3Q9P232 AC006270.2-201ENST00000578523 652 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.9□□□□□ -1.46
CNTN3Q9P232 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CNTN3Q9P232 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.9□□□□□ -1.46
CNTN3Q9P232 POLR3GP2-201ENST00000588366 668 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.9□□□□□ -1.46
CNTN3Q9P232 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 AC084781.2-201ENST00000615568 161 ntBASIC5.9□□□□□ -1.46
CNTN3Q9P232 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CNTN3Q9P232 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CNTN3Q9P232 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.9□□□□□ -1.46
CNTN3Q9P232 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CNTN3Q9P232 AL451142.2-201ENST00000429076 2090 ntBASIC5.9□□□□□ -1.47
CNTN3Q9P232 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
CNTN3Q9P232 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CNTN3Q9P232 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.9□□□□□ -1.47
CNTN3Q9P232 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
CNTN3Q9P232 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CNTN3Q9P232 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CNTN3Q9P232 MTND5P28-201ENST00000438005 1594 ntBASIC5.89□□□□□ -1.47
CNTN3Q9P232 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms