Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC88CQ9P219 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC88CQ9P219 AC017007.3-201ENST00000479865 435 ntBASIC2.73□□□□□ -1.97
CCDC88CQ9P219 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.73□□□□□ -1.97
CCDC88CQ9P219 RPL23AP94-201ENST00000512518 302 ntBASIC2.73□□□□□ -1.97
CCDC88CQ9P219 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC88CQ9P219 AC084757.1-201ENST00000559987 490 ntBASIC2.73□□□□□ -1.97
CCDC88CQ9P219 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC88CQ9P219 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC88CQ9P219 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CCDC88CQ9P219 MTND5P27-201ENST00000428871 1720 ntBASIC2.73□□□□□ -1.97
CCDC88CQ9P219 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC88CQ9P219 OR5J1P-201ENST00000313544 939 ntBASIC2.73□□□□□ -1.97
CCDC88CQ9P219 RNU6-859P-201ENST00000362728 107 ntBASIC2.73□□□□□ -1.97
CCDC88CQ9P219 AL109933.2-201ENST00000452651 260 ntBASIC2.73□□□□□ -1.97
CCDC88CQ9P219 RPL21P41-201ENST00000459863 264 ntBASIC2.73□□□□□ -1.97
CCDC88CQ9P219 AC021205.1-201ENST00000468797 348 ntBASIC2.73□□□□□ -1.97
CCDC88CQ9P219 DYNLL1P6-201ENST00000503440 264 ntBASIC2.73□□□□□ -1.97
CCDC88CQ9P219 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC88CQ9P219 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC88CQ9P219 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC88CQ9P219 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC88CQ9P219 uc_338.1-201ENST00000612113 180 ntBASIC2.73□□□□□ -1.97
CCDC88CQ9P219 CR392039.4-201ENST00000624968 501 ntBASIC2.73□□□□□ -1.97
CCDC88CQ9P219 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC88CQ9P219 GABRG2-229ENST00000641017 3628 ntBASIC2.73□□□□□ -1.97
CCDC88CQ9P219 AF127577.6-201ENST00000623352 2191 ntBASIC2.72□□□□□ -1.97
CCDC88CQ9P219 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC88CQ9P219 RNU1-112P-201ENST00000364401 164 ntBASIC2.72□□□□□ -1.97
CCDC88CQ9P219 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC88CQ9P219 RPL23AP4-201ENST00000427757 463 ntBASIC2.72□□□□□ -1.97
CCDC88CQ9P219 CBX1P4-201ENST00000439415 457 ntBASIC2.72□□□□□ -1.97
CCDC88CQ9P219 AL662791.1-201ENST00000441992 928 ntBASIC2.72□□□□□ -1.97
CCDC88CQ9P219 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC88CQ9P219 AC126389.1-201ENST00000477436 290 ntBASIC2.72□□□□□ -1.97
CCDC88CQ9P219 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.72□□□□□ -1.97
CCDC88CQ9P219 SCGB1D5P-201ENST00000515134 247 ntBASIC2.72□□□□□ -1.97
CCDC88CQ9P219 OR5AK3P-201ENST00000527486 1297 ntBASIC2.72□□□□□ -1.97
CCDC88CQ9P219 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC88CQ9P219 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC88CQ9P219 AC245100.7-201ENST00000609678 442 ntBASIC2.72□□□□□ -1.97
CCDC88CQ9P219 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC88CQ9P219 SCARNA15.3-201ENST00000626315 122 ntBASIC2.72□□□□□ -1.97
CCDC88CQ9P219 SCARNA4.1-201ENST00000628597 123 ntBASIC2.72□□□□□ -1.97
CCDC88CQ9P219 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CCDC88CQ9P219 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC88CQ9P219 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC88CQ9P219 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC88CQ9P219 MAPK10-362ENST00000641864 4484 ntBASIC2.72□□□□□ -1.97
CCDC88CQ9P219 GABPAP-201ENST00000419271 1356 ntBASIC2.71□□□□□ -1.97
CCDC88CQ9P219 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
CCDC88CQ9P219 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CCDC88CQ9P219 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.71□□□□□ -1.97
CCDC88CQ9P219 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.71□□□□□ -1.97
CCDC88CQ9P219 U3.12-201ENST00000364498 214 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 SNORA11C-201ENST00000408532 129 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 AC022018.1-201ENST00000430685 241 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 MTCYBP29-201ENST00000436327 1006 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 ELOCP23-201ENST00000452014 332 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 AC090525.1-201ENST00000479116 478 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 KATNBL1P4-201ENST00000503545 918 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC88CQ9P219 AC022790.1-201ENST00000522872 204 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 SMARCE1P4-201ENST00000523647 241 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 AC079600.2-201ENST00000550076 130 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 MIR4716-201ENST00000579628 84 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 AC083899.3-201ENST00000603413 594 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC88CQ9P219 SNORA51.4-201ENST00000364993 124 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 SNORA9.2-201ENST00000365361 133 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 RNU6-532P-201ENST00000384318 107 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC88CQ9P219 AC005002.1-201ENST00000447458 540 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC88CQ9P219 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC88CQ9P219 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC88CQ9P219 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC88CQ9P219 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC88CQ9P219 AC006023.1-201ENST00000603944 259 ntBASIC2.71□□□□□ -1.98
CCDC88CQ9P219 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CCDC88CQ9P219 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC88CQ9P219 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
CCDC88CQ9P219 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC88CQ9P219 AC021755.1-201ENST00000559747 1447 ntBASIC2.7□□□□□ -1.98
CCDC88CQ9P219 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC88CQ9P219 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC88CQ9P219 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC88CQ9P219 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CCDC88CQ9P219 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CCDC88CQ9P219 AL355379.1-201ENST00000405542 640 ntBASIC2.7□□□□□ -1.98
CCDC88CQ9P219 RNA5SP274-201ENST00000410484 108 ntBASIC2.7□□□□□ -1.98
CCDC88CQ9P219 RNU2-6P-201ENST00000411404 190 ntBASIC2.7□□□□□ -1.98
CCDC88CQ9P219 AC004987.3-201ENST00000413879 771 ntBASIC2.7□□□□□ -1.98
CCDC88CQ9P219 RN7SL283P-201ENST00000489055 303 ntBASIC2.7□□□□□ -1.98
CCDC88CQ9P219 AC092185.1-201ENST00000491371 97 ntBASIC2.7□□□□□ -1.98
CCDC88CQ9P219 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC88CQ9P219 FAM60DP-201ENST00000524174 632 ntBASIC2.7□□□□□ -1.98
CCDC88CQ9P219 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.7□□□□□ -1.98
CCDC88CQ9P219 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms