Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 OR5B10P-201ENST00000532869 642 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 MIR3922-201ENST00000585192 84 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 AC125494.3-201ENST00000602759 455 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 STMN1P1-201ENST00000617809 440 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 AC024595.1-201ENST00000623088 387 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 AC083865.1-201ENST00000636634 831 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 AL392088.2-201ENST00000637607 285 ntBASIC3.02□□□□□ -1.93
VAPAQ9P0L0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VAPAQ9P0L0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 RNU6-263P-201ENST00000363811 107 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 RNU6-1181P-201ENST00000384191 106 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 SNORA51.12-201ENST00000384448 134 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 AC092745.2-202ENST00000411880 369 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 HMGN1P24-201ENST00000412282 298 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 NDUFB4P5-201ENST00000415445 361 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 AC245054.2-201ENST00000415639 319 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 HSFY4P-201ENST00000415994 1181 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 AC009969.1-201ENST00000438726 172 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 AC114878.1-201ENST00000441166 358 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 RPL7P59-201ENST00000447700 943 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 AC104308.1-201ENST00000454621 333 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 AC108860.1-201ENST00000484521 383 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 MTND4LP31-201ENST00000514859 294 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 MTCO2P32-201ENST00000514865 403 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 AC083923.1-201ENST00000523708 376 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 HIGD1AP5-201ENST00000529959 259 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 AC067805.1-201ENST00000559344 470 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 RPL21P12-201ENST00000559810 515 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 MIR4474-201ENST00000579189 78 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 MIR2682-201ENST00000580305 110 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 AC004832.5-201ENST00000608677 401 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 AL136295.6-201ENST00000610486 658 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 uc_338.25-201ENST00000613756 156 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 AL034408.1-202ENST00000636088 415 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 AC017104.5-201ENST00000637647 639 ntBASIC3.01□□□□□ -1.93
VAPAQ9P0L0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VAPAQ9P0L0 MTND5P7-201ENST00000413558 1798 ntBASIC3□□□□□ -1.93
VAPAQ9P0L0 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3□□□□□ -1.93
VAPAQ9P0L0 AL355578.1-201ENST00000607405 1328 ntBASIC3□□□□□ -1.93
VAPAQ9P0L0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
VAPAQ9P0L0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
VAPAQ9P0L0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3□□□□□ -1.93
VAPAQ9P0L0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
VAPAQ9P0L0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VAPAQ9P0L0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3□□□□□ -1.93
VAPAQ9P0L0 RNA5SP129-201ENST00000410276 118 ntBASIC3□□□□□ -1.93
VAPAQ9P0L0 Y_RNA.625-201ENST00000411256 107 ntBASIC3□□□□□ -1.93
VAPAQ9P0L0 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3□□□□□ -1.93
VAPAQ9P0L0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3□□□□□ -1.93
VAPAQ9P0L0 MTND4P24-201ENST00000424002 397 ntBASIC3□□□□□ -1.93
VAPAQ9P0L0 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3□□□□□ -1.93
VAPAQ9P0L0 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3□□□□□ -1.93
VAPAQ9P0L0 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3□□□□□ -1.93
VAPAQ9P0L0 TRIM60P18-201ENST00000441518 828 ntBASIC3□□□□□ -1.93
VAPAQ9P0L0 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3□□□□□ -1.93
VAPAQ9P0L0 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3□□□□□ -1.93
VAPAQ9P0L0 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3□□□□□ -1.93
VAPAQ9P0L0 HMGB1P22-201ENST00000505315 124 ntBASIC3□□□□□ -1.93
VAPAQ9P0L0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3□□□□□ -1.93
VAPAQ9P0L0 RNU6-202P-201ENST00000515998 96 ntBASIC3□□□□□ -1.93
VAPAQ9P0L0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3□□□□□ -1.93
VAPAQ9P0L0 AF279873.1-201ENST00000523393 313 ntBASIC3□□□□□ -1.93
VAPAQ9P0L0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3□□□□□ -1.93
VAPAQ9P0L0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3□□□□□ -1.93
VAPAQ9P0L0 HIGD1AP1-201ENST00000550979 275 ntBASIC3□□□□□ -1.93
VAPAQ9P0L0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3□□□□□ -1.93
VAPAQ9P0L0 MIR5186-201ENST00000577504 120 ntBASIC3□□□□□ -1.93
VAPAQ9P0L0 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3□□□□□ -1.93
VAPAQ9P0L0 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 210.2 ms