Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 OR56A5-201ENST00000340110 738 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 Y_RNA.106-201ENST00000363189 100 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 Y_RNA.518-201ENST00000384552 113 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 MIR188-201ENST00000385034 86 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 RNU2-36P-201ENST00000410361 191 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 RN7SKP229-201ENST00000410465 302 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 RNU2-38P-201ENST00000410856 79 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 RPS15AP40-201ENST00000419621 391 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 CYP4F30P-202ENST00000420048 405 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 AC019185.1-201ENST00000442718 389 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 RPS23P3-201ENST00000470993 430 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 RN7SL101P-201ENST00000496350 279 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 AP005639.1-201ENST00000526939 192 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 OR11H5P-201ENST00000554039 926 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 IGHV3-29-201ENST00000604817 344 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 ATP5A1P2-202ENST00000616464 443 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 MIR6886-201ENST00000619864 61 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 MIR7159-201ENST00000620587 66 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 AC011369.2-201ENST00000624423 1567 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 DOCK11P1-201ENST00000553480 5932 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AL359854.1-201ENST00000614203 1594 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 RNU6-1243P-201ENST00000364028 107 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 Y_RNA.270-201ENST00000364693 104 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 Y_RNA.404-201ENST00000383978 102 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 RNU6-1093P-201ENST00000391194 107 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AL359643.1-201ENST00000404109 423 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 TIMM9P1-201ENST00000436122 256 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 RPL7L1P1-201ENST00000448259 785 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 SIAH1P1-201ENST00000479411 923 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 FO393415.2-201ENST00000480085 343 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AC093267.1-201ENST00000489176 961 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AC104057.1-201ENST00000515547 497 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 RNU4-77P-201ENST00000516692 156 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 RPSAP75-201ENST00000605848 301 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AC103705.1-201ENST00000619013 241 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 MIR6811-201ENST00000620409 58 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AC069234.4-201ENST00000621276 412 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 AC110373.1-201ENST00000505994 3505 ntBASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CUEDC1Q9NWM3 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms