Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.02□□□□□ -1.93
CISHQ9NSE2 AC091152.2-201ENST00000591628 2569 ntBASIC3.02□□□□□ -1.93
CISHQ9NSE2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CISHQ9NSE2 AC138915.3-201ENST00000562908 1389 ntBASIC3.01□□□□□ -1.93
CISHQ9NSE2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.01□□□□□ -1.93
CISHQ9NSE2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.01□□□□□ -1.93
CISHQ9NSE2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.01□□□□□ -1.93
CISHQ9NSE2 RPL9P7-201ENST00000330965 580 ntBASIC3.01□□□□□ -1.93
CISHQ9NSE2 RPL5P18-201ENST00000406671 891 ntBASIC3.01□□□□□ -1.93
CISHQ9NSE2 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.01□□□□□ -1.93
CISHQ9NSE2 AC244505.4-201ENST00000434905 287 ntBASIC3.01□□□□□ -1.93
CISHQ9NSE2 SSXP5-201ENST00000443473 287 ntBASIC3.01□□□□□ -1.93
CISHQ9NSE2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.01□□□□□ -1.93
CISHQ9NSE2 RPL31P53-201ENST00000457065 348 ntBASIC3.01□□□□□ -1.93
CISHQ9NSE2 RN7SL330P-201ENST00000469709 307 ntBASIC3.01□□□□□ -1.93
CISHQ9NSE2 AP001025.2-201ENST00000490908 477 ntBASIC3.01□□□□□ -1.93
CISHQ9NSE2 AL035404.1-201ENST00000497982 568 ntBASIC3.01□□□□□ -1.93
CISHQ9NSE2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.01□□□□□ -1.93
CISHQ9NSE2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.01□□□□□ -1.93
CISHQ9NSE2 AC010306.1-201ENST00000523223 1117 ntBASIC3.01□□□□□ -1.93
CISHQ9NSE2 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.01□□□□□ -1.93
CISHQ9NSE2 CYCSP39-201ENST00000565821 309 ntBASIC3.01□□□□□ -1.93
CISHQ9NSE2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.01□□□□□ -1.93
CISHQ9NSE2 AL513477.2-201ENST00000607858 568 ntBASIC3.01□□□□□ -1.93
CISHQ9NSE2 AC135507.2-201ENST00000612443 309 ntBASIC3.01□□□□□ -1.93
CISHQ9NSE2 AC121761.2-201ENST00000617300 689 ntBASIC3.01□□□□□ -1.93
CISHQ9NSE2 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CISHQ9NSE2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CISHQ9NSE2 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CISHQ9NSE2 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CISHQ9NSE2 EI24P2-201ENST00000397776 1076 ntBASIC3□□□□□ -1.93
CISHQ9NSE2 AC096664.2-201ENST00000411843 406 ntBASIC3□□□□□ -1.93
CISHQ9NSE2 TRIM60P3Y-201ENST00000432201 673 ntBASIC3□□□□□ -1.93
CISHQ9NSE2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3□□□□□ -1.93
CISHQ9NSE2 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3□□□□□ -1.93
CISHQ9NSE2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3□□□□□ -1.93
CISHQ9NSE2 NPM1P49-201ENST00000448027 714 ntBASIC3□□□□□ -1.93
CISHQ9NSE2 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3□□□□□ -1.93
CISHQ9NSE2 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3□□□□□ -1.93
CISHQ9NSE2 AC003982.1-202ENST00000469928 248 ntBASIC3□□□□□ -1.93
CISHQ9NSE2 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3□□□□□ -1.93
CISHQ9NSE2 AC091826.1-201ENST00000514065 313 ntBASIC3□□□□□ -1.93
CISHQ9NSE2 SNORD116-30-201ENST00000516468 85 ntBASIC3□□□□□ -1.93
CISHQ9NSE2 RNA5SP380-201ENST00000517190 98 ntBASIC3□□□□□ -1.93
CISHQ9NSE2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3□□□□□ -1.93
CISHQ9NSE2 FAM60CP-201ENST00000591086 664 ntBASIC3□□□□□ -1.93
CISHQ9NSE2 AC010615.3-201ENST00000597319 394 ntBASIC3□□□□□ -1.93
CISHQ9NSE2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3□□□□□ -1.93
CISHQ9NSE2 AC011816.2-201ENST00000607089 556 ntBASIC3□□□□□ -1.93
CISHQ9NSE2 AC048347.1-201ENST00000624621 427 ntBASIC3□□□□□ -1.93
CISHQ9NSE2 AL137790.1-201ENST00000634283 177 ntBASIC3□□□□□ -1.93
CISHQ9NSE2 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3□□□□□ -1.93
CISHQ9NSE2 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3□□□□□ -1.93
CISHQ9NSE2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
CISHQ9NSE2 AC008264.2-201ENST00000610193 3731 ntBASIC3□□□□□ -1.93
CISHQ9NSE2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3□□□□□ -1.93
CISHQ9NSE2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CISHQ9NSE2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CISHQ9NSE2 AC093010.3-201ENST00000570269 15214 ntBASIC3□□□□□ -1.93
CISHQ9NSE2 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.99□□□□□ -1.93
CISHQ9NSE2 ZNF33CP-201ENST00000432492 2030 ntBASIC2.99□□□□□ -1.93
CISHQ9NSE2 AIMP1P1-201ENST00000418670 937 ntBASIC2.99□□□□□ -1.93
CISHQ9NSE2 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.99□□□□□ -1.93
CISHQ9NSE2 AL645937.1-202ENST00000421799 937 ntBASIC2.99□□□□□ -1.93
CISHQ9NSE2 VDAC1P3-201ENST00000434069 851 ntBASIC2.99□□□□□ -1.93
CISHQ9NSE2 SETP5-201ENST00000437270 562 ntBASIC2.99□□□□□ -1.93
CISHQ9NSE2 AL513043.1-201ENST00000439124 535 ntBASIC2.99□□□□□ -1.93
CISHQ9NSE2 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.99□□□□□ -1.93
CISHQ9NSE2 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CISHQ9NSE2 AC092754.2-201ENST00000463506 460 ntBASIC2.99□□□□□ -1.93
CISHQ9NSE2 AC126121.1-201ENST00000482313 553 ntBASIC2.99□□□□□ -1.93
CISHQ9NSE2 RN7SL283P-201ENST00000489055 303 ntBASIC2.99□□□□□ -1.93
CISHQ9NSE2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.99□□□□□ -1.93
CISHQ9NSE2 HMGB3P15-201ENST00000507326 574 ntBASIC2.99□□□□□ -1.93
CISHQ9NSE2 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.99□□□□□ -1.93
CISHQ9NSE2 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.99□□□□□ -1.93
CISHQ9NSE2 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.99□□□□□ -1.93
CISHQ9NSE2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.99□□□□□ -1.93
CISHQ9NSE2 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.99□□□□□ -1.93
CISHQ9NSE2 AC008083.2-201ENST00000546707 476 ntBASIC2.99□□□□□ -1.93
CISHQ9NSE2 AL389895.1-201ENST00000554127 252 ntBASIC2.99□□□□□ -1.93
CISHQ9NSE2 MIR3186-201ENST00000577404 85 ntBASIC2.99□□□□□ -1.93
CISHQ9NSE2 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.99□□□□□ -1.93
CISHQ9NSE2 AC006111.3-201ENST00000622137 383 ntBASIC2.99□□□□□ -1.93
CISHQ9NSE2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CISHQ9NSE2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CISHQ9NSE2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.98□□□□□ -1.93
CISHQ9NSE2 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CISHQ9NSE2 RNA5SP189-201ENST00000364920 115 ntBASIC2.98□□□□□ -1.93
CISHQ9NSE2 SNORA51.4-201ENST00000364993 124 ntBASIC2.98□□□□□ -1.93
CISHQ9NSE2 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CISHQ9NSE2 GSTA12P-201ENST00000402398 508 ntBASIC2.98□□□□□ -1.93
CISHQ9NSE2 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.98□□□□□ -1.93
CISHQ9NSE2 HMGB1P13-201ENST00000406019 642 ntBASIC2.98□□□□□ -1.93
CISHQ9NSE2 Z92545.1-201ENST00000411782 234 ntBASIC2.98□□□□□ -1.93
CISHQ9NSE2 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.98□□□□□ -1.93
CISHQ9NSE2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.98□□□□□ -1.93
CISHQ9NSE2 AL392003.1-201ENST00000434394 243 ntBASIC2.98□□□□□ -1.93
CISHQ9NSE2 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.98□□□□□ -1.93
CISHQ9NSE2 KATNBL1P4-201ENST00000503545 918 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms