Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC010198.2-201ENST00000550612 259 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AL121576.1-201ENST00000556055 276 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 MIR3186-201ENST00000577404 85 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AP001029.3-201ENST00000588063 596 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AC006116.10-201ENST00000591836 581 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AL513477.2-201ENST00000607858 568 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AC112503.2-201ENST00000609005 552 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 RMST_8.1-201ENST00000610287 165 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AC008121.2-201ENST00000614647 523 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AL355365.1-201ENST00000616480 294 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AP001002.2-201ENST00000625137 386 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 FRG1DP-201ENST00000635586 771 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AL163152.1-201ENST00000642001 374 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 AC002546.1-201ENST00000588041 2504 ntBASIC3.61□□□□□ -1.83
TM9SF3Q9HD45 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 RNU6-1226P-201ENST00000384317 107 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 Y_RNA.493-201ENST00000384422 102 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 ATP5F1P6-201ENST00000402768 767 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 RPS15AP29-201ENST00000445539 400 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 HMGB3P8-201ENST00000449709 577 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AC008155.2-201ENST00000464337 397 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AC025181.1-201ENST00000477507 416 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 NPM1P17-201ENST00000479221 602 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 SETP14-201ENST00000497538 873 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 SNORA70.18-201ENST00000516696 98 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 NCAPGP2-201ENST00000557911 754 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 CYP2C60P-201ENST00000566088 139 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AL669831.4-202ENST00000590817 238 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 VN1R88P-201ENST00000596787 292 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AF131215.7-201ENST00000602443 707 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AC012467.1-201ENST00000607740 256 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AC013468.1-201ENST00000608680 598 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 VIS1.1-201ENST00000610517 203 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 MIR7851-201ENST00000610611 160 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AC073569.3-201ENST00000619055 682 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AL356490.1-201ENST00000623079 479 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 MIR3651-201ENST00000630427 90 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 OR6C71P-202ENST00000641886 1107 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
TM9SF3Q9HD45 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AL353746.1-201ENST00000566293 6881 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 RNU1-33P-201ENST00000364249 162 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 RNVU1-3-201ENST00000364313 161 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AL391417.1-201ENST00000404100 426 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AL583834.1-201ENST00000406943 343 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 RNU4-78P-201ENST00000410940 126 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 HMGB3P23-201ENST00000414981 585 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 HIGD1AP12-201ENST00000427832 281 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AC073508.1-201ENST00000428866 656 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AC010881.1-201ENST00000433830 235 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AL645931.1-201ENST00000439737 410 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AC010655.1-201ENST00000449336 292 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 RBMY2UP-201ENST00000453474 324 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms