Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 RNA5SP356-201ENST00000515972 94 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 AC025260.1-201ENST00000548858 430 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 VN1R84P-201ENST00000593697 235 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 AL592494.3-201ENST00000609485 464 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 AP001148.1-201ENST00000624124 2359 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 U3.12-201ENST00000364498 214 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 MIR9-1-201ENST00000385198 89 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 RPL31P45-201ENST00000419532 356 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 AC019097.1-201ENST00000424783 735 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 ARF4P2-201ENST00000430209 526 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 UBE2V2P4-201ENST00000447495 259 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 TVP23BP2-201ENST00000455082 615 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 AC126389.1-201ENST00000477436 290 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 AL390838.2-201ENST00000602394 274 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.56□□□□□ -2
KIAA1549Q9HCM3 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.56□□□□□ -2
KIAA1549Q9HCM3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 RNU6-851P-201ENST00000384565 107 ntBASIC2.55□□□□□ -2
KIAA1549Q9HCM3 HSPE1P26-201ENST00000405341 275 ntBASIC2.55□□□□□ -2
KIAA1549Q9HCM3 RNA5SP274-201ENST00000410484 108 ntBASIC2.55□□□□□ -2
KIAA1549Q9HCM3 RNA5SP21-201ENST00000410917 96 ntBASIC2.55□□□□□ -2
KIAA1549Q9HCM3 AL139281.1-201ENST00000422120 335 ntBASIC2.55□□□□□ -2
KIAA1549Q9HCM3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 AC093278.1-201ENST00000494700 600 ntBASIC2.55□□□□□ -2
KIAA1549Q9HCM3 DYNLL1P6-201ENST00000503440 264 ntBASIC2.55□□□□□ -2
KIAA1549Q9HCM3 AC027309.2-201ENST00000520566 192 ntBASIC2.55□□□□□ -2
KIAA1549Q9HCM3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 AC234775.3-201ENST00000564612 656 ntBASIC2.55□□□□□ -2
KIAA1549Q9HCM3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 AC022146.1-201ENST00000595307 847 ntBASIC2.55□□□□□ -2
KIAA1549Q9HCM3 XIST_intron.1-201ENST00000619444 68 ntBASIC2.55□□□□□ -2
KIAA1549Q9HCM3 AC024023.1-201ENST00000624530 922 ntBASIC2.55□□□□□ -2
KIAA1549Q9HCM3 AC048347.1-201ENST00000624621 427 ntBASIC2.55□□□□□ -2
KIAA1549Q9HCM3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.55□□□□□ -2
KIAA1549Q9HCM3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AP006437.1-201ENST00000641440 3685 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 ARF4P3-201ENST00000397387 509 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 MTND4LP20-201ENST00000402379 270 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 NDUFB4P5-201ENST00000415445 361 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 MTCO1P52-201ENST00000433928 531 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AC069277.2-201ENST00000454211 432 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AL590639.1-201ENST00000456484 337 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 HMGB1P25-201ENST00000468402 607 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 RN7SL432P-201ENST00000484057 298 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AC108860.1-201ENST00000484521 383 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 RN7SL633P-201ENST00000488974 297 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AC147055.1-201ENST00000509261 750 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 RNA5SP309-201ENST00000516670 106 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AC087276.1-201ENST00000529659 480 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 RPL23AP61-201ENST00000623642 466 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AL138785.1-201ENST00000425821 331 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 HMGB3P30-201ENST00000457863 606 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms