Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RNU1-95P-201ENST00000516357 160 ntBASIC3.52□□□□□ -1.85
LRRC40Q9H9A6 RNU1-128P-201ENST00000516704 160 ntBASIC3.52□□□□□ -1.85
LRRC40Q9H9A6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.52□□□□□ -1.85
LRRC40Q9H9A6 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.52□□□□□ -1.85
LRRC40Q9H9A6 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.52□□□□□ -1.85
LRRC40Q9H9A6 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.52□□□□□ -1.85
LRRC40Q9H9A6 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.52□□□□□ -1.85
LRRC40Q9H9A6 AL389895.1-201ENST00000554127 252 ntBASIC3.52□□□□□ -1.85
LRRC40Q9H9A6 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.52□□□□□ -1.85
LRRC40Q9H9A6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.52□□□□□ -1.85
LRRC40Q9H9A6 AC098679.5-201ENST00000624394 571 ntBASIC3.52□□□□□ -1.85
LRRC40Q9H9A6 AC032011.1-201ENST00000611703 1549 ntBASIC3.52□□□□□ -1.85
LRRC40Q9H9A6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.52□□□□□ -1.85
LRRC40Q9H9A6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
LRRC40Q9H9A6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LRRC40Q9H9A6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 ZNF285B-201ENST00000561698 1767 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 RNA5SP258-201ENST00000362750 119 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 RNU6-989P-201ENST00000362756 107 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 EI24P2-201ENST00000397776 1076 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 RSL24D1P1-201ENST00000404972 493 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 AC017079.2-201ENST00000416102 485 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 FAM204CP-201ENST00000424489 642 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 AL512661.1-201ENST00000434586 1253 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 AC007389.2-201ENST00000434630 306 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 B3GNT2P1-201ENST00000434960 952 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 AC002542.1-201ENST00000440683 193 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 AL034418.1-201ENST00000448675 860 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 RPL7P15-201ENST00000461190 712 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 PRDX3P4-201ENST00000470828 747 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 AC087312.1-201ENST00000471411 480 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 AC012181.1-201ENST00000479895 423 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 OR5H5P-201ENST00000503164 928 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 PRELID3BP4-201ENST00000515476 571 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 AC107934.2-201ENST00000518653 310 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 RPL12P22-201ENST00000519073 490 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 AL121603.1-201ENST00000553815 142 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 GTF2IP22-201ENST00000554443 182 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 AC106785.1-201ENST00000565935 262 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 AC117529.2-201ENST00000512159 2068 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 AC021755.1-201ENST00000559747 1447 ntBASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
LRRC40Q9H9A6 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 RNU1-64P-201ENST00000365443 163 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 SNORA5A-201ENST00000384111 134 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 SNORD65C-201ENST00000390962 71 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 RN7SKP202-201ENST00000410439 330 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 OR51A3P-201ENST00000413596 924 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AC246680.2-201ENST00000422106 389 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 NIPA2P1-201ENST00000426223 976 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AC006548.1-201ENST00000427470 102 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 MTCYBP31-201ENST00000438855 1122 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 HSFY3P-201ENST00000444242 1191 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 SSXP4-201ENST00000451349 245 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AC104073.1-201ENST00000451988 151 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AC006539.3-201ENST00000454258 129 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 RPS4XP2-201ENST00000458402 793 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AC010401.1-201ENST00000463867 348 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AC021205.2-201ENST00000480069 347 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AC104619.4-201ENST00000510773 249 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 RN7SKP13-201ENST00000515933 244 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms