Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.49□□□□□ -1.85
NXF3Q9H4D5 TMF1P1-201ENST00000576058 373 ntBASIC3.49□□□□□ -1.85
NXF3Q9H4D5 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.49□□□□□ -1.85
NXF3Q9H4D5 AF131215.7-201ENST00000602443 707 ntBASIC3.49□□□□□ -1.85
NXF3Q9H4D5 AC005776.1-201ENST00000603164 290 ntBASIC3.49□□□□□ -1.85
NXF3Q9H4D5 AC138932.5-201ENST00000617759 563 ntBASIC3.49□□□□□ -1.85
NXF3Q9H4D5 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.49□□□□□ -1.85
NXF3Q9H4D5 AC006065.5-201ENST00000623427 349 ntBASIC3.49□□□□□ -1.85
NXF3Q9H4D5 AC103798.2-201ENST00000624292 632 ntBASIC3.49□□□□□ -1.85
NXF3Q9H4D5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.49□□□□□ -1.85
NXF3Q9H4D5 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NXF3Q9H4D5 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NXF3Q9H4D5 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.49□□□□□ -1.85
NXF3Q9H4D5 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.49□□□□□ -1.85
NXF3Q9H4D5 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
NXF3Q9H4D5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AP001148.1-201ENST00000624124 2359 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 GNG5P1-201ENST00000255500 204 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 RNU6-252P-201ENST00000363232 107 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AC007899.1-201ENST00000412776 775 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 RPL7P44-201ENST00000424827 742 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 BX890604.2-201ENST00000427883 474 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 FO393419.3-201ENST00000428741 282 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 RPL23AP69-201ENST00000431134 458 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 PTP4A1P3-201ENST00000433661 420 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AC006994.1-201ENST00000438212 839 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 RPS7P5-201ENST00000441482 581 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 MRPS31P2-201ENST00000451581 518 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 TRBV8-2-201ENST00000475637 270 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AC021205.2-201ENST00000480069 347 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 RPL7P23-201ENST00000493874 747 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 RNA5SP341-201ENST00000516261 117 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 SNORA31.13-201ENST00000516624 135 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 RNU6-1231P-201ENST00000517185 103 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AC008562.1-201ENST00000521763 330 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 OSBPL9P3-201ENST00000534523 595 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AC074029.1-201ENST00000552531 1044 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 TGIF1P1-201ENST00000558095 802 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AC106782.4-201ENST00000568264 210 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 MIR4425-201ENST00000580572 84 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AC011374.2-201ENST00000607135 526 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AL592295.2-201ENST00000612578 206 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AC006249.1-201ENST00000621223 471 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AC018692.3-201ENST00000623929 123 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
NXF3Q9H4D5 AL592494.2-201ENST00000425455 1548 ntBASIC3.48□□□□□ -1.85
NXF3Q9H4D5 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 MIR184-201ENST00000384962 84 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 RNU2-17P-201ENST00000410290 190 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 LINC01347-201ENST00000417964 355 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AC008065.1-201ENST00000428525 348 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 CST9LP2-201ENST00000437612 320 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AC004801.2-202ENST00000463559 283 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AC005921.1-201ENST00000510589 286 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 RN7SKP60-201ENST00000516985 239 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AL139174.1-201ENST00000531489 886 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AC092451.2-201ENST00000538746 658 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AC006518.1-201ENST00000541449 943 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 UBL5P2-201ENST00000583788 219 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AC018618.2-201ENST00000604770 446 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AL133445.2-201ENST00000611191 527 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 uc_338.25-201ENST00000613756 156 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AL162274.2-201ENST00000614406 332 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 AP003400.6-201ENST00000624698 740 ntBASIC3.47□□□□□ -1.85
NXF3Q9H4D5 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NXF3Q9H4D5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms