Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PHOX2BQ99453 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PHOX2BQ99453 Y_RNA.19-201ENST00000362462 99 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 RN7SKP160-201ENST00000363804 340 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 SNORA23-201ENST00000365128 182 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 Y_RNA.477-201ENST00000384352 108 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 OR3A2-201ENST00000408891 1076 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 ELOCP20-201ENST00000422460 345 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.6□□□□□ -1.35
PHOX2BQ99453 AL133396.1-201ENST00000432048 687 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.6□□□□□ -1.35
PHOX2BQ99453 FTH1P25-201ENST00000447665 469 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.6□□□□□ -1.35
PHOX2BQ99453 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC6.6□□□□□ -1.35
PHOX2BQ99453 RNU7-187P-201ENST00000458985 68 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 AC066616.1-201ENST00000486795 413 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.6□□□□□ -1.35
PHOX2BQ99453 HMGB1P35-201ENST00000503360 598 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.6□□□□□ -1.35
PHOX2BQ99453 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.6□□□□□ -1.35
PHOX2BQ99453 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.6□□□□□ -1.35
PHOX2BQ99453 AL133399.1-201ENST00000527476 298 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.6□□□□□ -1.35
PHOX2BQ99453 ACTG1P15-201ENST00000570019 1063 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 AC006600.1-201ENST00000572529 153 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 MIR5692A1-201ENST00000580523 69 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC6.6□□□□□ -1.35
PHOX2BQ99453 AC012119.1-201ENST00000603184 222 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 HMGB1P50-201ENST00000605814 607 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 MIR6811-201ENST00000620409 58 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 AC130454.1-201ENST00000622948 401 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC6.6□□□□□ -1.35
PHOX2BQ99453 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.6□□□□□ -1.35
PHOX2BQ99453 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.6□□□□□ -1.35
PHOX2BQ99453 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.6□□□□□ -1.35
PHOX2BQ99453 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PHOX2BQ99453 HSPA8P4-201ENST00000511877 1920 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
PHOX2BQ99453 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PHOX2BQ99453 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PHOX2BQ99453 AC093849.1-201ENST00000563631 2209 ntBASIC6.6□□□□□ -1.35
PHOX2BQ99453 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PHOX2BQ99453 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
PHOX2BQ99453 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PHOX2BQ99453 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
PHOX2BQ99453 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PHOX2BQ99453 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PHOX2BQ99453 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
PHOX2BQ99453 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
PHOX2BQ99453 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PHOX2BQ99453 RNA5SP110-201ENST00000362638 115 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 U3.7-201ENST00000363668 216 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 Y_RNA.180-201ENST00000363867 113 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 AL590704.1-201ENST00000402856 794 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 RNU6-174P-201ENST00000410406 106 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 U3.43-201ENST00000410734 213 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 RNU2-71P-201ENST00000411395 189 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 RPL21P50-201ENST00000417698 477 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.59□□□□□ -1.35
PHOX2BQ99453 GAPDHP27-201ENST00000447427 1020 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 AC007967.1-201ENST00000455422 1159 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 RN7SL834P-201ENST00000461450 286 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 RPL7AP23-201ENST00000482625 776 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 MTND6P8-201ENST00000503471 522 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.59□□□□□ -1.35
PHOX2BQ99453 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.59□□□□□ -1.35
PHOX2BQ99453 ACA59.1-201ENST00000515966 143 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 RNA5SP438-201ENST00000516561 112 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 AC120036.3-201ENST00000517826 292 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 CDH12P4-201ENST00000517835 295 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 CDH12P3-201ENST00000517935 295 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 CDH12P1-201ENST00000518435 295 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.59□□□□□ -1.35
PHOX2BQ99453 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.59□□□□□ -1.35
PHOX2BQ99453 AC092121.1-201ENST00000569452 202 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 MIR4433B-201ENST00000581329 102 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 MIR4273-201ENST00000582824 84 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.59□□□□□ -1.35
PHOX2BQ99453 RPS29P30-201ENST00000600975 111 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC6.59□□□□□ -1.35
PHOX2BQ99453 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.59□□□□□ -1.35
PHOX2BQ99453 AC004805.3-201ENST00000603178 310 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.59□□□□□ -1.35
PHOX2BQ99453 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.59□□□□□ -1.35
PHOX2BQ99453 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PHOX2BQ99453 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.59□□□□□ -1.35
PHOX2BQ99453 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PHOX2BQ99453 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PHOX2BQ99453 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PHOX2BQ99453 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PHOX2BQ99453 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.36
PHOX2BQ99453 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PHOX2BQ99453 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PHOX2BQ99453 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.59□□□□□ -1.36
PHOX2BQ99453 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
PHOX2BQ99453 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.59□□□□□ -1.36
PHOX2BQ99453 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
PHOX2BQ99453 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PHOX2BQ99453 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms