Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP47Q96K76 AL445437.1-201ENST00000623157 3087 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USP47Q96K76 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
USP47Q96K76 RNU6-31P-201ENST00000384388 108 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 MIR7-1-201ENST00000384871 110 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.02□□□□□ -1.77
USP47Q96K76 OOSP1P1-201ENST00000423265 274 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 SEC63P1-201ENST00000425785 1258 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.02□□□□□ -1.77
USP47Q96K76 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.02□□□□□ -1.77
USP47Q96K76 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.02□□□□□ -1.77
USP47Q96K76 FABP5P6-201ENST00000510588 409 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USP47Q96K76 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.02□□□□□ -1.77
USP47Q96K76 AC079600.2-201ENST00000550076 130 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 AC074029.2-201ENST00000551045 634 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.02□□□□□ -1.77
USP47Q96K76 MIR4319-201ENST00000577285 85 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 MIR4644-201ENST00000579929 84 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.02□□□□□ -1.77
USP47Q96K76 AC017076.1-201ENST00000607613 578 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 AC245100.7-201ENST00000609678 442 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 AC009039.2-201ENST00000624524 529 ntBASIC4.02□□□□□ -1.77
USP47Q96K76 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
USP47Q96K76 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USP47Q96K76 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.01□□□□□ -1.77
USP47Q96K76 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USP47Q96K76 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
USP47Q96K76 RNU1-35P-201ENST00000362782 153 ntBASIC4.01□□□□□ -1.77
USP47Q96K76 RNA5SP498-201ENST00000411342 120 ntBASIC4.01□□□□□ -1.77
USP47Q96K76 AL592148.1-201ENST00000413568 445 ntBASIC4.01□□□□□ -1.77
USP47Q96K76 TRGV6-201ENST00000417928 299 ntBASIC4.01□□□□□ -1.77
USP47Q96K76 RPS29P6-201ENST00000438196 145 ntBASIC4.01□□□□□ -1.77
USP47Q96K76 NPM1P13-201ENST00000452663 865 ntBASIC4.01□□□□□ -1.77
USP47Q96K76 IFNWP4-201ENST00000453148 294 ntBASIC4.01□□□□□ -1.77
USP47Q96K76 HMGN2P7-201ENST00000456186 273 ntBASIC4.01□□□□□ -1.77
USP47Q96K76 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.01□□□□□ -1.77
USP47Q96K76 SCGB1D5P-201ENST00000515134 247 ntBASIC4.01□□□□□ -1.77
USP47Q96K76 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.01□□□□□ -1.77
USP47Q96K76 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.01□□□□□ -1.77
USP47Q96K76 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.01□□□□□ -1.77
USP47Q96K76 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.01□□□□□ -1.77
USP47Q96K76 AC009101.1-201ENST00000568135 242 ntBASIC4.01□□□□□ -1.77
USP47Q96K76 AP004372.1-201ENST00000604842 844 ntBASIC4.01□□□□□ -1.77
USP47Q96K76 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.01□□□□□ -1.77
USP47Q96K76 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
USP47Q96K76 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USP47Q96K76 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
USP47Q96K76 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4□□□□□ -1.77
USP47Q96K76 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
USP47Q96K76 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
USP47Q96K76 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP47Q96K76 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP47Q96K76 AL139095.1-201ENST00000404326 391 ntBASIC4□□□□□ -1.77
USP47Q96K76 RNU6ATAC40P-201ENST00000408580 137 ntBASIC4□□□□□ -1.77
USP47Q96K76 AL451074.5-201ENST00000415894 435 ntBASIC4□□□□□ -1.77
USP47Q96K76 AL645937.1-202ENST00000421799 937 ntBASIC4□□□□□ -1.77
USP47Q96K76 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4□□□□□ -1.77
USP47Q96K76 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4□□□□□ -1.77
USP47Q96K76 AC233982.1-201ENST00000451247 436 ntBASIC4□□□□□ -1.77
USP47Q96K76 AC003982.1-202ENST00000469928 248 ntBASIC4□□□□□ -1.77
USP47Q96K76 RN7SL432P-201ENST00000484057 298 ntBASIC4□□□□□ -1.77
USP47Q96K76 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP47Q96K76 AC010486.1-201ENST00000511793 424 ntBASIC4□□□□□ -1.77
USP47Q96K76 RNU6-551P-201ENST00000516661 103 ntBASIC4□□□□□ -1.77
USP47Q96K76 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4□□□□□ -1.77
USP47Q96K76 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4□□□□□ -1.77
USP47Q96K76 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4□□□□□ -1.77
USP47Q96K76 AL049844.2-201ENST00000604280 628 ntBASIC4□□□□□ -1.77
USP47Q96K76 AC009318.3-201ENST00000616916 503 ntBASIC4□□□□□ -1.77
USP47Q96K76 AC139769.3-201ENST00000618383 175 ntBASIC4□□□□□ -1.77
USP47Q96K76 AL355493.4-201ENST00000618530 292 ntBASIC4□□□□□ -1.77
USP47Q96K76 AC007390.2-201ENST00000606229 3803 ntBASIC3.99□□□□□ -1.77
USP47Q96K76 MTCO1P8-201ENST00000416914 1523 ntBASIC3.99□□□□□ -1.77
USP47Q96K76 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
USP47Q96K76 GTF2H2B-203ENST00000508065 1432 ntBASIC3.99□□□□□ -1.77
USP47Q96K76 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP47Q96K76 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.99□□□□□ -1.77
USP47Q96K76 RNA5SP184-201ENST00000411071 108 ntBASIC3.99□□□□□ -1.77
USP47Q96K76 AC009965.2-201ENST00000425328 970 ntBASIC3.99□□□□□ -1.77
USP47Q96K76 MTCO1P52-201ENST00000433928 531 ntBASIC3.99□□□□□ -1.77
USP47Q96K76 AP002345.1-201ENST00000456493 928 ntBASIC3.99□□□□□ -1.77
USP47Q96K76 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
USP47Q96K76 NIPA2P2-201ENST00000496376 1083 ntBASIC3.99□□□□□ -1.77
USP47Q96K76 HMGB1P47-201ENST00000511281 589 ntBASIC3.99□□□□□ -1.77
USP47Q96K76 AC108120.2-201ENST00000512973 294 ntBASIC3.99□□□□□ -1.77
USP47Q96K76 RN7SKP132-201ENST00000516001 208 ntBASIC3.99□□□□□ -1.77
USP47Q96K76 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.99□□□□□ -1.77
USP47Q96K76 AC007424.1-203ENST00000554613 687 ntBASIC3.99□□□□□ -1.77
USP47Q96K76 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.99□□□□□ -1.77
USP47Q96K76 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP47Q96K76 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.99□□□□□ -1.77
USP47Q96K76 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.99□□□□□ -1.77
USP47Q96K76 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
USP47Q96K76 OR11H5P-202ENST00000641612 1325 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
USP47Q96K76 AC062016.1-201ENST00000355719 319 ntBASIC3.98□□□□□ -1.77
USP47Q96K76 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms