Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RSL24D1P6-201ENST00000426934 401 ntBASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 AL356276.2-201ENST00000435919 558 ntBASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 AC129850.1-201ENST00000436203 508 ntBASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 EEF1E1P1-201ENST00000446998 430 ntBASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 ARPC3P5-201ENST00000448802 534 ntBASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 AC103987.1-201ENST00000473394 348 ntBASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 PPBPP1-201ENST00000510807 373 ntBASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 AC106038.2-201ENST00000520706 568 ntBASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 MTCYBP22-201ENST00000603788 447 ntBASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 AC080013.4-201ENST00000607624 649 ntBASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 AC073114.1-201ENST00000612027 490 ntBASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 PNPT1P2-201ENST00000456768 2050 ntBASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CHMP4CQ96CF2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 RNVU1-3-201ENST00000364313 161 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 RNU6-660P-201ENST00000364566 109 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AC011933.1-201ENST00000413334 321 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 HSFY4P-201ENST00000415994 1181 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 RPL7P30-201ENST00000420888 709 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AC011998.1-201ENST00000433403 117 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 RPL23AP52-201ENST00000439311 478 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 UBE2V1P3-201ENST00000439651 417 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AL162388.1-201ENST00000450912 352 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AC116533.1-201ENST00000459748 321 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 OR5BC1P-201ENST00000529327 739 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AC084824.1-201ENST00000550917 1005 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 ACTR3BP3-201ENST00000565577 979 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AL031985.2-201ENST00000600955 480 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 Z98200.1-201ENST00000607298 470 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AC245008.1-201ENST00000608123 476 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 Z69908.1-201ENST00000622603 247 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AL356266.1-201ENST00000623311 483 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 AC092192.1-201ENST00000633154 1018 ntBASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP4CQ96CF2 MTCO1P23-201ENST00000415223 1526 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AC012020.1-201ENST00000624541 1728 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 MT-TH-201ENST00000387441 69 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 Z99497.1-201ENST00000421282 135 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 BX119904.4-201ENST00000424402 301 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AC092017.2-201ENST00000427600 362 ntBASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.18□□□□□ -1.58
CHMP4CQ96CF2 AL831737.1-201ENST00000441288 271 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms