Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC010326.1-201ENST00000462726 602 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 RPL7AP28-201ENST00000464513 571 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 KLF3P2-201ENST00000465138 268 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC006967.1-201ENST00000467608 589 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 RPL35AP15-201ENST00000468042 339 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC126182.1-201ENST00000478134 357 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC083982.1-201ENST00000485679 344 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 TMEM251P1-201ENST00000503717 318 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 NDUFA5P12-201ENST00000503796 343 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 IFITM8P-201ENST00000522529 394 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC105233.3-201ENST00000531125 744 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 LSM6P2-201ENST00000552208 177 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC124068.1-201ENST00000563131 678 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AL133457.1-201ENST00000564251 987 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC007546.1-201ENST00000619452 559 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 RNU6-156P-201ENST00000621869 107 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC019278.1-201ENST00000623516 479 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 U6.101-201ENST00000637707 76 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC027228.2-201ENST00000567141 2154 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AP002907.1-201ENST00000606361 1430 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC012020.1-201ENST00000624541 1728 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC125257.1-201ENST00000560400 2930 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC006378.2-201ENST00000623178 2476 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC008033.1-201ENST00000216407 1162 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 RNA5SP391-201ENST00000363456 119 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 RNU6-297P-201ENST00000384636 107 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 SNORA40.3-201ENST00000390964 122 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 MIR937-201ENST00000401271 86 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 MIR320C1-201ENST00000408566 88 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 RN7SKP266-201ENST00000410232 287 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 RNU6-248P-201ENST00000410720 107 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AIMP1P1-201ENST00000418670 937 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AL356583.2-201ENST00000426536 280 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC023347.2-201ENST00000433994 462 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 LSM1P1-201ENST00000438629 273 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 DNAJC19P4-201ENST00000440115 345 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 GDI2P2-201ENST00000445131 608 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AL589765.3-201ENST00000446084 462 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AL033528.1-201ENST00000453780 140 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 RPL7P22-201ENST00000466005 733 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 RN7SL354P-201ENST00000469282 294 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 RN7SL826P-201ENST00000479724 288 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 RPL7P24-201ENST00000493052 752 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 FTH1P24-201ENST00000503502 462 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AF131216.2-201ENST00000512316 564 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC104986.1-201ENST00000517978 436 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 PHBP17-201ENST00000528576 541 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AGGF1P8-201ENST00000562979 1000 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 MIR5697-201ENST00000578045 78 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 RN7SL690P-201ENST00000582087 240 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 MAGOH2P-202ENST00000584384 429 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC233280.2-201ENST00000603917 1070 ntBASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4AQ8WYN0 AC109347.2-201ENST00000610220 349 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms