Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 TEX41-204ENST00000423031 491 ntTSL 4 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 RPL23AP16-201ENST00000441715 421 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC009097.3-201ENST00000563557 1018 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 IGHV3-29-201ENST00000604817 344 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 RPS3P1-201ENST00000456781 192 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC090525.1-201ENST00000479116 478 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC092185.1-201ENST00000491371 97 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 RNA5SP458-201ENST00000516188 119 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 FAM133CP-201ENST00000332869 704 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 SNORA46-201ENST00000384762 135 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 RNA5SP356-201ENST00000515972 94 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 RNA5SP380-201ENST00000517190 98 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC025946.2-201ENST00000603398 234 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AL354950.1-201ENST00000614150 568 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 SNORD15B-201ENST00000384714 146 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC239798.3-201ENST00000454459 408 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC093278.1-201ENST00000494700 600 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC024153.1-201ENST00000603103 365 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 RPL5P19-201ENST00000404228 893 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 RPS15AP6-201ENST00000420703 385 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 GLRXP1-201ENST00000423261 334 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 RPS20P5-201ENST00000434808 360 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC112653.1-201ENST00000443851 386 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 MTND4LP12-201ENST00000448237 295 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 SEPT7P6-201ENST00000469999 1143 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 RPS4XP22-201ENST00000480755 780 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC114781.4-201ENST00000513707 639 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC107934.2-201ENST00000518653 310 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 TTN-204ENST00000360870 18218 ntTSL 5 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 ELF2P3-201ENST00000445099 1506 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AL356057.3-201ENST00000402607 340 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC019097.1-201ENST00000424783 735 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 RPL23AP11-201ENST00000475260 469 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 NIPA2P2-201ENST00000496376 1083 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 IGKV3-31-201ENST00000523109 329 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 Y_RNA.164-201ENST00000363709 102 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 Y_RNA.355-201ENST00000365462 98 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 RN7SKP220-201ENST00000410611 288 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 NDUFB4P5-201ENST00000415445 361 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AL513174.1-201ENST00000423182 629 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AL592494.2-201ENST00000425455 1548 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AL356489.2-201ENST00000566968 3528 ntBASIC0.89□□□□□ -2.27
SYNE1Q8NF91 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC0.89□□□□□ -2.27
SYNE1Q8NF91 MIR26A1-201ENST00000362205 77 ntBASIC0.88□□□□□ -2.27
SYNE1Q8NF91 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC0.88□□□□□ -2.27
SYNE1Q8NF91 AC005189.1-201ENST00000431286 310 ntBASIC0.88□□□□□ -2.27
SYNE1Q8NF91 ISCA1P2-201ENST00000438679 421 ntBASIC0.88□□□□□ -2.27
SYNE1Q8NF91 AL357520.1-201ENST00000441557 453 ntBASIC0.88□□□□□ -2.27
SYNE1Q8NF91 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.88□□□□□ -2.27
SYNE1Q8NF91 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC0.88□□□□□ -2.27
SYNE1Q8NF91 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms