Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC026427.2-201ENST00000506228 536 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AC006499.2-201ENST00000513470 337 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 PAICSP4-201ENST00000517543 1253 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 LSM6P2-201ENST00000552208 177 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 MIR5186-201ENST00000577504 120 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 MIR4637-201ENST00000582405 84 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 uc_338.13-201ENST00000618243 179 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AL357559.1-201ENST00000622228 274 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 OR5BE1P-202ENST00000641168 1176 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 AL731532.2-201ENST00000623542 1953 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 MAPK10-304ENST00000641341 3984 ntBASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.41□□□□□ -1.54
SMC1BQ8NDV3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 PHKBP1-201ENST00000450951 1951 ntBASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 OR10J6P-201ENST00000289731 930 ntBASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 RPL21P65-201ENST00000406094 466 ntBASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 SNRPEP7-201ENST00000438350 220 ntBASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AL592447.1-201ENST00000447592 540 ntBASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AC002553.2-201ENST00000453217 340 ntBASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 GMPSP1-201ENST00000514075 579 ntBASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 OR4A45P-201ENST00000529954 901 ntBASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AC105233.3-201ENST00000531125 744 ntBASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AC008127.2-201ENST00000549925 1075 ntBASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AC010546.1-201ENST00000569391 485 ntBASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AC012065.4-201ENST00000602445 679 ntBASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AC073648.5-201ENST00000603502 305 ntBASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AL159169.3-201ENST00000608871 561 ntBASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 AC078899.5-201ENST00000612475 178 ntBASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SMC1BQ8NDV3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
SMC1BQ8NDV3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SMC1BQ8NDV3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SMC1BQ8NDV3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SMC1BQ8NDV3 MTND4P16-201ENST00000466108 1367 ntBASIC5.4□□□□□ -1.55
SMC1BQ8NDV3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.4□□□□□ -1.55
SMC1BQ8NDV3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.4□□□□□ -1.55
SMC1BQ8NDV3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SMC1BQ8NDV3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 RNU6-1042P-201ENST00000384204 107 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AL023807.1-201ENST00000407932 359 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 Z92545.1-201ENST00000411782 234 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 RPS27AP14-201ENST00000422868 454 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 OR8F1P-201ENST00000425243 930 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 RPL36P19-201ENST00000430744 301 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AC092162.1-201ENST00000432828 434 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 EEF1E1P1-201ENST00000446998 430 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 MTCYBP1-201ENST00000454315 1119 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 ARL2BPP4-201ENST00000506854 471 ntBASIC5.39□□□□□ -1.55
SMC1BQ8NDV3 AC018797.3-201ENST00000513388 1241 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms