Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 KCTD10P1-201ENST00000434203 625 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 RPL7P31-201ENST00000450192 724 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 BX276092.4-201ENST00000452056 248 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 RPL23AP81-201ENST00000455252 467 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 RPS15AP17-201ENST00000470598 390 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 MTND3P7-201ENST00000474435 343 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 PGBD4P4-201ENST00000509673 613 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AC006499.2-201ENST00000513470 337 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 RNA5SP216-201ENST00000516111 123 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 RNA5SP73-201ENST00000516744 108 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 RN7SKP277-201ENST00000516895 283 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AC092470.1-201ENST00000546187 132 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 OR7K1P-201ENST00000546439 926 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 HNRNPCP4-201ENST00000571636 900 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 RN7SL600P-201ENST00000581811 299 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AC110760.3-201ENST00000598794 467 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AC083899.3-201ENST00000603413 594 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AL139395.1-201ENST00000603662 160 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 BNIP3P11-201ENST00000603878 563 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AC105129.3-201ENST00000605455 485 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 RNU6-88P-201ENST00000606801 100 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AC091931.1-201ENST00000623488 728 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AF246928.1-201ENST00000623768 87 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 U6.101-201ENST00000637707 76 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AC068254.2-201ENST00000623938 3577 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 DDX43P2-201ENST00000604753 1354 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 MIR513A2-201ENST00000385249 127 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 ARF4P3-201ENST00000397387 509 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 EIF5P1-201ENST00000400019 1231 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 HMGB1P17-201ENST00000403495 628 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AL031577.2-201ENST00000404133 280 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 VN1R8P-201ENST00000407739 893 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 MIR1302-8-201ENST00000408342 128 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 RNU6-628P-201ENST00000410675 107 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 UBTFL3-201ENST00000418934 1024 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 NANOGP6-201ENST00000429190 847 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 BMS1P19-201ENST00000433925 393 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 HSFY6P-201ENST00000445573 403 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 MTCO3P16-201ENST00000454456 754 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AC072039.1-201ENST00000477611 581 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 UBTFL6-201ENST00000477929 1024 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 RPS6P4-201ENST00000494693 758 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 LTV1P1-201ENST00000510683 1237 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AC099522.1-202ENST00000514718 367 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AC080013.6-201ENST00000606185 215 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AC024560.3-201ENST00000608482 349 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AL138721.1-201ENST00000616756 179 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AC112484.5-201ENST00000624189 228 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 PCMTD1P7-201ENST00000634506 357 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 MIR4496-201ENST00000635896 61 ntBASIC3.91□□□□□ -1.78
BEST3Q8N1M1 AC008013.2-202ENST00000637965 364 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms