Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AC068657.1-201ENST00000520807 306 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 COX6B1P6-201ENST00000522347 255 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AF279873.1-201ENST00000523393 313 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AC011611.1-201ENST00000552179 197 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 CBX3P2-202ENST00000583365 535 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 SUMO2P14-201ENST00000604488 293 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AC018816.2-201ENST00000621460 353 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AL138880.1-201ENST00000405824 642 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 RPS7P15-201ENST00000415804 584 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 MTND4LP7-201ENST00000431728 294 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 FTH1P1-201ENST00000437933 532 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 RPS15AP1-201ENST00000457423 391 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AC089999.1-201ENST00000460336 374 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AC091179.1-201ENST00000461606 579 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 RPL21P10-201ENST00000463521 490 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 RPL7P5-201ENST00000471472 736 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AC025181.1-201ENST00000477507 416 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AC006483.1-201ENST00000487308 313 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AC092185.1-201ENST00000491371 97 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 RN7SKP157-201ENST00000516174 282 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 HAUS1P3-201ENST00000523909 662 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 OR4H12P-201ENST00000556269 907 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AC090751.1-201ENST00000566966 267 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AC005242.1-201ENST00000585658 438 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AL109653.1-201ENST00000603091 248 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AL133393.1-201ENST00000603277 287 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AC024220.1-201ENST00000603675 484 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AC012467.1-201ENST00000607740 256 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 uc_338.25-201ENST00000613756 156 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AC009464.1-201ENST00000615731 469 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AL118508.4-201ENST00000624142 1176 ntBASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDKL3Q8IVW4 AC004925.1-201ENST00000624256 2706 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 AC107081.3-201ENST00000612715 2034 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 RNU6-335P-201ENST00000364563 113 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 MTATP6P31-201ENST00000406985 692 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 MTCO3P4-201ENST00000419236 787 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 RPF2P1-201ENST00000424137 906 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 RPL7P46-201ENST00000425129 740 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 TRIM60P18-201ENST00000441518 828 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 HSPE1P28-201ENST00000443139 211 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 MTND5P8-201ENST00000449817 1083 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 CYCSP35-201ENST00000451978 304 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 BX276092.4-201ENST00000452056 248 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 RPL21P8-201ENST00000465083 535 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 HMGB1P38-201ENST00000490557 577 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 AC245166.1-201ENST00000521012 253 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 TRAV37-201ENST00000553906 342 ntBASIC3.28□□□□□ -1.88
CDKL3Q8IVW4 MIR2682-201ENST00000580305 110 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms