Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SNORA51.2-201ENST00000364595 132 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 SNORD3H-201ENST00000384486 214 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AC007066.1-201ENST00000392902 381 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 RPL32P35-201ENST00000415214 394 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AC246680.2-201ENST00000422106 389 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AL009174.1-201ENST00000426577 416 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 VDAC1P3-201ENST00000434069 851 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 CST9LP2-201ENST00000437612 320 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 RPS29P7-201ENST00000439662 171 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AC017099.1-201ENST00000448261 1028 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 PTGES3P5-201ENST00000455109 434 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AC103987.1-201ENST00000473394 348 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 RPS27AP1-201ENST00000475545 471 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AC012181.1-201ENST00000479895 423 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AC112198.1-201ENST00000505369 1220 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 PRELID3BP4-201ENST00000515476 571 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 RNA5SP217-201ENST00000515959 91 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 RNU1-143P-201ENST00000516296 146 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 RN7SKP116-201ENST00000516902 319 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AC011611.5-201ENST00000552477 578 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 RN7SL703P-201ENST00000578485 302 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 MIR5685-201ENST00000579080 79 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 U1.23-201ENST00000610293 146 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 RNU1-68P-201ENST00000615382 146 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 U1.39-201ENST00000621562 146 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AL122126.1-201ENST00000546905 1318 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 MTCO1P4-201ENST00000520516 1409 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 MTND5P27-201ENST00000428871 1720 ntBASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NUDCD3Q8IVD9 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 RNU6-335P-201ENST00000364563 113 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AP002784.2-201ENST00000397300 549 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AL138880.1-201ENST00000405824 642 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AC008280.1-201ENST00000418851 412 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AC012065.2-201ENST00000421295 375 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 MTCO2P1-201ENST00000424648 477 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 UBE2D3P3-201ENST00000426992 425 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 RPS26P56-201ENST00000444468 240 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 RPL7P59-201ENST00000447700 943 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 RPL7P52-201ENST00000449200 742 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AC104308.1-201ENST00000454621 333 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 PRDX3P4-201ENST00000470828 747 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 OR4R3P-201ENST00000525084 838 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AC124293.1-201ENST00000530034 493 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 HSPE1P5-201ENST00000561489 272 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AC015917.1-201ENST00000579654 510 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AL020997.3-201ENST00000602843 359 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AC007566.2-201ENST00000603642 413 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AC067959.1-201ENST00000604334 379 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 HSPE1P14-201ENST00000605812 302 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AC016542.1-201ENST00000608259 493 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AC107294.3-201ENST00000609211 526 ntBASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.31□□□□□ -1.88
NUDCD3Q8IVD9 CR383658.2-201ENST00000547576 1525 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms